Interface IDocumentReader
The IDocumentReader interface gives the functionality to read the Chemical
Structures from a given document.
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Method Summary
Modifier and TypeMethodDescriptionvoid
close()
Closes the office document stream.Reads all the molecules from the given documentGives back all exceptions occurred while processing the document.boolean
Determines if the document contains JCO structure.isObjectJCO
(Object range) Determines if the given POI object can be handled as a JCO object with molecule content.
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Method Details
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getAllStructures
Reads all the molecules from the given document- Returns:
- MoleculeMap array with the molecules and their locations
- Throws:
Exception
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isDocumentJCO
boolean isDocumentJCO()Determines if the document contains JCO structure.- Returns:
- True if the document contains JCO structure.
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isObjectJCO
Determines if the given POI object can be handled as a JCO object with molecule content.Example how to use the isObjectJCO from PowerPoint:
XMLSlideShow pptx = new XMLSlideShow(inputStream); XSLFShape groupShape = pptx.getSlides().get(0).getShapes().get(0); XSLFShape pictureShape = null; List
innerShapes = ((XSLFGroupShape) groupShape).getShapes(); for (XSLFShape innerShape : innerShapes) { if (innerShape.getClass().getName().equals("org.apache.poi.xslf.usermodel.XSLFPictureShape")) { pictureShape = innerShape; } } inputStream.close(); IDocumentReader reader = DocumentHandlerFactory.CreateReader(inputStream); -- Check group shape MoleculeMap map = reader.isObjectJCO(groupShape); -- or Check picture shape MoleculeMap map = reader.isObjectJCO(pictureShape); Example how to use the isObjectJCO from Word:
XWPFDocument doc = new XWPFDocument(inputStream); XWPFParagraph paragraph = doc.getTables().get(0).getRow(0).getTableCells().get(0).getParagraphs().get(0); XWPFRun run = paragraph.getRuns().get(0); inputStream.close(); IDocumentReader reader = DocumentHandlerFactory.CreateReader(inputStream); -- Check the paragraph MoleculeMap mapPicture = reader.isObjectJCO(paragraph); -- Or check the run MoleculeMap mapPicture = reader.isObjectJCO(run); inputStream.close(); reader.close();
- Parameters:
range
- - The POI object (i.e.: groupShape, pictureShape, paragraph, run)- Returns:
- If the passed parameter is a JCO object it returns the MoleculeMap from it otherwise returns an empty MoleculeMap object.
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close
Closes the office document stream.- Throws:
IOException
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getExceptions
BatchProcessingException getExceptions()Gives back all exceptions occurred while processing the document.- Returns:
- Returns with a throwable IOException that collects inner exceptions occurred in the batch processing.
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