Package chemaxon.jchem.db

Class JChemSearch.DissimilarityMetrics

java.lang.Object

chemaxon.jchem.db.JChemSearch.DissimilarityMetrics

Enclosing class:

JChemSearch

public static class JChemSearch.DissimilarityMetrics
extends Object

Class for presenting the available dissimilarity metrics for similarity search.

Since:

JChem 3.2

Field Summary

Fields

Modifier and Type	Field	Description
float[]	defaultDissimilarityMetricThresholds	The default tresholds for the available metrics, in the same order as metricNames
int	defaultMetricIndex	The index of the default metric, referring to metricNames, starting from 0.
String[]	metricNames	The names of the available metrics (e.g {"tanimoto","tversky"})
String	name	The name of the similarity search method (for display)
int[]	numOfParam	Number of parameters for each metric
String[]	paramDefault	For every metric: default values for parameters separated with "," e.g.
String[]	paramHelp	Help text for every metric.
String[]	paramNames	For every metric: names of the parameters enumerated and separated with "," e.g.
String[]	paramRanges	For every metric: ranges for parameters separated with "," e.g.

Constructor Summary

Constructors

Constructor	Description
DissimilarityMetrics()

Method Summary

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

name

public String name

The name of the similarity search method (for display)

metricNames

public String[] metricNames

The names of the available metrics (e.g {"tanimoto","tversky"})

numOfParam

public int[] numOfParam

Number of parameters for each metric

paramNames

public String[] paramNames

For every metric: names of the parameters enumerated and separated with "," e.g. {"","queryWeight,targetWeight"}

paramRanges

public String[] paramRanges

For every metric: ranges for parameters separated with "," e.g. {"","0..1,0..1"}

paramDefault

public String[] paramDefault

For every metric: default values for parameters separated with "," e.g. {"","0.5,0.5"}

defaultDissimilarityMetricThresholds

public float[] defaultDissimilarityMetricThresholds

The default tresholds for the available metrics, in the same order as metricNames

paramHelp

public String[] paramHelp

Help text for every metric.

defaultMetricIndex

public int defaultMetricIndex

The index of the default metric, referring to metricNames, starting from 0.

Constructor Details

DissimilarityMetrics

public DissimilarityMetrics()