chemaxon.checkers

Class MissingAtomMapChecker

java.lang.Object

chemaxon.checkers.AbstractStructureChecker

chemaxon.checkers.ComponentChecker<MolAtom>

chemaxon.checkers.AtomChecker

chemaxon.checkers.MissingAtomMapChecker

All Implemented Interfaces:

StructureChecker, chemaxon.license.Licensable, java.beans.PropertyChangeListener, java.lang.Cloneable, java.util.EventListener

@PublicAPI
public class MissingAtomMapChecker
extends AtomChecker

MissingAtomMapChecker detects unmapped atoms.

Since:

Marvin 5.3

Version:

5.7

Author:

Attila Szabo

Field Summary

Fields inherited from class chemaxon.checkers.AbstractStructureChecker

errorType, propertyChangeSupport

Fields inherited from interface chemaxon.checkers.StructureChecker

PROPERTY_KEY_VALID

Constructor Summary

Constructors

Constructor and Description
MissingAtomMapChecker() Default constructor

Method Summary

Modifier and Type	Method and Description
protected boolean	check(Molecule molecule, MolAtom atom) Check the atom of the molecule with index i has no atom map.

Methods inherited from class chemaxon.checkers.AtomChecker

createResult, getComponent, getComponentCount

Methods inherited from class chemaxon.checkers.ComponentChecker

check1, initialize

Methods inherited from class chemaxon.checkers.AbstractStructureChecker

addPropertyChangeListener, addPropertyChangeListener, check, clone, cloneItem, convertResult, equals, expandMolecule, getDescription, getDescriptor, getEditorClassName, getErrorCode, getErrorDescription, getErrorType, getHelpText, getIcon, getLocalMenuName, getName, hashCode, isAvailable, isLicensed, isValid, propertyChange, removePropertyChangeListener, removePropertyChangeListener, setDescription, setHelpText, setIcon, setLicenseEnvironment, setLocalMenuName, setMoreErrorMessage, setName, setNoErrorMessage, setOneErrorMessage, toString

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

MissingAtomMapChecker

public MissingAtomMapChecker()

Default constructor

Method Detail

check

protected boolean check(Molecule molecule,
                        MolAtom atom)

Check the atom of the molecule with index i has no atom map.

Specified by:

check in class ComponentChecker<MolAtom>

Parameters:

molecule - is a Molecule instance

atom - the current component to check

Returns:

true if the component has problem, false otherwise