Package chemaxon.fixers
Interface StructureFixer
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- All Known Implementing Classes:
AbsentChiralFlagFixer
,AbsoluteStereoFixer
,AbstractStructureFixer
,AddChiralFlagFixer
,BondAngleFixer
,BondLengthFixer
,CleanFixer
,ClearWedgeFixer
,ContractGroupFixer
,ConvertAliasToGroupFixer
,ConvertPseudoToGroupFixer
,ConvertToAtomFixer
,ConvertToCarbonFixer
,ConvertToCrossedDoubleBondFixer
,ConvertToElementalFormFixer
,ConvertToIonicFormFixer
,ConvertToPlainDoubleBondFixer
,ConvertToSingleBondFixer
,ConvertToWigglyDoubleBondFixer
,CrossedDoubleBondFixer
,DearomatizeFixer
,DistanceBasedMetalloceneFixer
,ExpandGroupFixer
,ExplicitHydrogenFixer
,FlipWedgeBondFixer
,IsotopeFixer
,MapMoleculeFixer
,MapReactionFixer
,MetalloceneFixer
,NeutralizeChargeFixer
,PartialCleanFixer
,RearomatizeFixer
,RearrangeWedgesFixer
,RemoveAliasFixer
,RemoveAtomFixer
,RemoveAtomMapFixer
,RemoveAtomQueryPropertyFixer
,RemoveAtomValueFixer
,RemoveAttachedDataFixer
,RemoveBondFixer
,RemoveBracketsFixer
,RemoveChiralFlagFixer
,RemoveExplicitHydrogenFixer
,RemoveInvalidChiralFlagFixer
,RemoveRadicalFixer
,RemoveReactingCenterBondMarkFixer
,RemoveStereoCareBoxFixer
,RemoveStereoInversionRetentionMarkFixer
,RemoveUnreferencedRgroupDefinitionsFixer
,RemoveValencePropertyFixer
,RemoveZCoordinateFixer
,RgroupAttachmentFixer
,SubstructureFixer
,UngroupFixer
,ValenceFixer
,WedgeCleanFixer
,WigglyDoubleBondFixer
@PublicAPI public interface StructureFixer
- Since:
- Marvin 5.3
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Method Summary
All Methods Instance Methods Abstract Methods Deprecated Methods Modifier and Type Method Description boolean
fix(StructureCheckerResult result)
Fixes one molecule problem identified by the resultString
getDescription()
Deprecated.StructureFixerDescriptor
getDescriptor()
Gets the descriptor object of the fixer.String
getName()
Deprecated.void
setDescription(String description)
Deprecated.void
setName(String Name)
Deprecated.
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Method Detail
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fix
boolean fix(StructureCheckerResult result)
Fixes one molecule problem identified by the result- Parameters:
result
- is an instance ofStructureCheckerResult
which identifies the problem- Returns:
- true if the fix was successful false otherwise
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getDescription
@Deprecated String getDescription()
Deprecated.- Returns:
- the description of the fixer
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setDescription
@Deprecated void setDescription(String description)
Deprecated.Sets the description of the fixer- Parameters:
description
- is aString
instance
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getName
@Deprecated String getName()
Deprecated.- Returns:
- the name of the fixer
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setName
@Deprecated void setName(String Name)
Deprecated.Sets the name of the fixer- Parameters:
Name
- is aString
instance
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getDescriptor
StructureFixerDescriptor getDescriptor()
Gets the descriptor object of the fixer.- Returns:
- the descriptor object
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