chemaxon.formats

Class MolConverter.Options

java.lang.Object

chemaxon.formats.MolConverter.Builder

chemaxon.formats.MolConverter.Options

Enclosing class:

MolConverter

Deprecated.

as of Marvin 5.2.3, use MolConverter.Builder instead.

@Deprecated
public static class MolConverter.Options
extends MolConverter.Builder

Constructor Summary

Constructors

Constructor and Description
Options() Deprecated.

Method Summary

Modifier and Type	Method and Description
void	addInput(java.io.File f, java.lang.String opts) Deprecated.
void	addInput(java.io.InputStream is, java.lang.String opts) Deprecated.
void	addInput(java.lang.String fname, java.lang.String opts) Deprecated.
MolConverter	build() Deprecated.
MolConverter.Builder	clean(int dim) Deprecated.
MolConverter.Builder	clean(int dim, java.lang.String opts) Deprecated.
void	clear() Deprecated.
protected java.lang.Object	clone() Deprecated.
int	getInputCount() Deprecated.
void	setEncodings(java.lang.String enc) Deprecated.
void	setFields(java.lang.String[] fields) Deprecated.
void	setOutput(java.io.File f, java.lang.String fmtopts) Deprecated.
void	setOutput(java.io.OutputStream out, java.lang.String fmtopts) Deprecated.
void	setOutput(java.lang.String fname, java.lang.String fmtopts) Deprecated.
void	setOutputFlags(int outflags) Deprecated.

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Options

@Deprecated
public Options()

Deprecated.

Method Detail

addInput

@Deprecated
public void addInput(java.io.File f,
                                 java.lang.String opts)

Deprecated.

Description copied from class: MolConverter.Builder

Adds an input file.

Overrides:

addInput in class MolConverter.Builder

Parameters:

f - the file

opts - import options or null

addInput

@Deprecated
public void addInput(java.io.InputStream is,
                                 java.lang.String opts)

Deprecated.

Description copied from class: MolConverter.Builder

Adds an input stream.

Overrides:

addInput in class MolConverter.Builder

Parameters:

is - the input stream

opts - import options or null

addInput

@Deprecated
public void addInput(java.lang.String fname,
                                 java.lang.String opts)

Deprecated.

Description copied from class: MolConverter.Builder

Adds an input file.

Overrides:

addInput in class MolConverter.Builder

Parameters:

fname - the file's path

opts - import options or null

build

@Deprecated
public MolConverter build()
                               throws MolFormatException,
                                      MolExportException,
                                      java.io.IOException,
                                      java.lang.IllegalArgumentException

Deprecated.

Description copied from class: MolConverter.Builder

Builds the MolConverter.

Overrides:

build in class MolConverter.Builder

Returns:

the new MolConverter

Throws:

MolFormatException - If the molecule file is in a format that cannot be read

MolExportException - If the molecule cannot be exported in the specified format

java.io.IOException - If I/O error occurred when determining the file format.

java.lang.IllegalArgumentException - Invalid format string (fmt).

clean

@Deprecated
public MolConverter.Builder clean(int dim,
                                              java.lang.String opts)

Deprecated.

Description copied from class: MolConverter.Builder

Enables cleaning.

Overrides:

clean in class MolConverter.Builder

Parameters:

dim - cleaning dimension, 2 or 3

opts - cleaning options

Returns:

this builder object

clean

@Deprecated
public MolConverter.Builder clean(int dim)

Deprecated.

Description copied from class: MolConverter.Builder

Enables cleaning.

Overrides:

clean in class MolConverter.Builder

Parameters:

dim - cleaning dimension, 2 or 3

Returns:

this builder object

clear

@Deprecated
public void clear()

Deprecated.

Description copied from class: MolConverter.Builder

Clears all settings.

Overrides:

clear in class MolConverter.Builder

clone

@Deprecated
protected java.lang.Object clone()

Deprecated.

Description copied from class: MolConverter.Builder

Clones the object.

Overrides:

clone in class MolConverter.Builder

getInputCount

@Deprecated
public int getInputCount()

Deprecated.

Description copied from class: MolConverter.Builder

Gets the number of input files/streams.

Overrides:

getInputCount in class MolConverter.Builder

Returns:

the number of input files/streams

setEncodings

@Deprecated
public void setEncodings(java.lang.String enc)

Deprecated.

Description copied from class: MolConverter.Builder

Sets the input and/or output encoding.

Overrides:

setEncodings in class MolConverter.Builder

Parameters:

enc - the input and/or output encodings in INCHARSET..OUTCHARSET format

setFields

@Deprecated
public void setFields(java.lang.String[] fields)

Deprecated.

Description copied from class: MolConverter.Builder

Sets the included fields to be shown in a table.

Overrides:

setFields in class MolConverter.Builder

Parameters:

fields - the fields

setOutput

@Deprecated
public void setOutput(java.io.File f,
                                  java.lang.String fmtopts)

Deprecated.

Description copied from class: MolConverter.Builder

Sets the output file.

Overrides:

setOutput in class MolConverter.Builder

Parameters:

f - the output file

fmtopts - file format and options (or null)

setOutput

@Deprecated
public void setOutput(java.io.OutputStream out,
                                  java.lang.String fmtopts)

Deprecated.

Description copied from class: MolConverter.Builder

Sets the output stream.

Overrides:

setOutput in class MolConverter.Builder

Parameters:

out - the output stream

fmtopts - file format and options (or null)

setOutput

@Deprecated
public void setOutput(java.lang.String fname,
                                  java.lang.String fmtopts)

Deprecated.

Description copied from class: MolConverter.Builder

Sets the output file.

Overrides:

setOutput in class MolConverter.Builder

Parameters:

fname - the output file's path

fmtopts - file format and options (or null)

setOutputFlags

@Deprecated
public void setOutputFlags(int outflags)

Deprecated.

Description copied from class: MolConverter.Builder

Sets output flags.

Overrides:

setOutputFlags in class MolConverter.Builder

Parameters:

outflags - output flags, a combination of MolExporter.TEXT and MolExporter.MULTIPLE