See: Description
Interface | Description |
---|---|
StandardizerConfigurationReader |
This interface is provided for classes which can read the configuration of
StandardizerActionRunner Configuration error There are 2 kinds of configuration errors for execution configuration. |
Class | Description |
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StandardizerActionStringReader |
An implementation of
StandardizerConfigurationReader for parsing
action stringsIf the configuration contains references to molecules/molecule files not contained by the configuration file, the base path of the configuration must be set by the method StandardizerActionStringReader.setPath(String)
before gathering the configuration.Syntax of action strings: <actionString>::=<actionStringEntry>(..<actionStringEntry>) * <actionStringEntry>::=<standardizerAction>|<groupDefinitions& gt;<standardizerAction> <groupDefinitions>::=<groupDefinition>(,<groupDefinition>)* <groupDefinition>::=(a-zA-Z0-9)+ <standardizerAction>::=<actionName>|<actionName>< parameters> <actionName>::=(a-zA-Z0-9)+ <parameters>::=<parameter>(:<parameter>)* <parameter>::=<key>| '<extendedKey>'|<key>=<value>|<key>='<extendedValu e & g t ; ' <key>::=(a-zA-Z0-9)+ <value>::=(anything\{.':,"})* <extendedKey>::=(anything\{'" })* <extendedValue>::=(anything\{'"})* |
StandardizerXMLReader |
XML Configuration reader for standardizer configurations.
If the configuration contains references to molecules/molecule files not contained by the configuration file, the base path of the configuration must be set by the method StandardizerActionStringReader.setPath(String)
before getting the configuration. |