Package chemaxon.checkers

Class AttachedDataChecker

java.lang.Object

chemaxon.checkers.AbstractStructureChecker

chemaxon.checkers.AttachedDataChecker

All Implemented Interfaces:

StructureChecker, chemaxon.license.Licensable, PropertyChangeListener, Cloneable, EventListener

@PublicAPI
public class AttachedDataChecker
extends AbstractStructureChecker

A descendant of AbstractStructureChecker detecting attached data in the molecule.

Since:

Marvin 5.3

Field Summary

Fields

Modifier and Type	Field	Description
static String	PROPERTY_KEY_EXCLUDED	This public constant String represents the name of the property which is responsible for the list of excluded data.
static String	PROPERTY_KEY_IS_EXCLUSION_REGEXP	The name of the property, which is responsible for the decision if the excluded data should be treated as a regular expression instead of a (comma separated) list of strings.
static String	PROPERTY_KEY_SEARCH_EXCLUDED
static String	PROPERTY_KEY_SEARCH_WITH_REGEXP_EXCLUSION

Fields inherited from class chemaxon.checkers.AbstractStructureChecker

errorType, propertyChangeSupport

Fields inherited from interface chemaxon.checkers.StructureChecker

PROPERTY_KEY_VALID

Constructor Summary

Constructors

Constructor	Description
AttachedDataChecker()	Default constructor.
AttachedDataChecker(Map<String,String> params)	Parameterized constructor.

Method Summary

Modifier and Type	Method	Description
protected StructureCheckerResult	check1(Molecule molecule)	Detects attached data in the molecule
boolean	equals(Object obj)
chemaxon.checkers.util.DataExclusionList	getExcluded()	Any attached data that matches this descriptor won't appear as the result of this checker.
int	hashCode()
boolean	isExclusionRegexp()	Tells how to interpret the AtomLabels: A comma separated list or a regular expression.
boolean	isValid()	Returns true if the checker's configuration is valid, false otherwise
void	setExcluded(chemaxon.checkers.util.DataExclusionList excluded)
void	setExclusionRegexp(boolean value)	Sets if the descriptor of the excluded-data (AtomLabels) should be treated as a regular expression (see also: isExclusionRegexp()

Methods inherited from class chemaxon.checkers.AbstractStructureChecker

addPropertyChangeListener, addPropertyChangeListener, check, clone, cloneItem, convertResult, expandMolecule, getDescription, getDescriptor, getEditorClassName, getErrorCode, getErrorDescription, getErrorType, getHelpText, getIcon, getLocalMenuName, getName, isAvailable, isLicensed, propertyChange, removePropertyChangeListener, removePropertyChangeListener, setDescription, setHelpText, setIcon, setLicenseEnvironment, setLocalMenuName, setMoreErrorMessage, setName, setNoErrorMessage, setOneErrorMessage, toString

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

PROPERTY_KEY_EXCLUDED

public static final String PROPERTY_KEY_EXCLUDED

This public constant String represents the name of the property which is responsible for the list of excluded data.

See Also:

Constant Field Values

PROPERTY_KEY_IS_EXCLUSION_REGEXP

public static final String PROPERTY_KEY_IS_EXCLUSION_REGEXP

The name of the property, which is responsible for the decision if the excluded data should be treated as a regular expression instead of a (comma separated) list of strings.

See Also:

Constant Field Values

PROPERTY_KEY_SEARCH_EXCLUDED

public static final String PROPERTY_KEY_SEARCH_EXCLUDED

See Also:

Constant Field Values

PROPERTY_KEY_SEARCH_WITH_REGEXP_EXCLUSION

public static final String PROPERTY_KEY_SEARCH_WITH_REGEXP_EXCLUSION

See Also:

Constant Field Values

Constructor Detail

AttachedDataChecker

public AttachedDataChecker()

Default constructor. No exclusion is done on data.

AttachedDataChecker

public AttachedDataChecker(Map<String,String> params)

Parameterized constructor. If "excluded" parameter is given, then the data, that "matches" this parameter value, won't appear in the result. Here "matches" can mean two things:

• If the "isExclusionRegexp" parameter is not set to "true", then the parameter value is treated as a comma separated list. Any exact match from this list is a match.
• The parameter is treated as a regular expression otherwise (see Pattern). A match to this regular expression is a match.

Parameters:

params - a Map instance which contains String pairs. Key is the name of the parameter. (exclusion

Method Detail

check1

protected StructureCheckerResult check1(Molecule molecule)

Detects attached data in the molecule

Specified by:

check1 in class AbstractStructureChecker

Parameters:

molecule - the Molecule instance to be checked for problems

Returns:

a StructureCheckerResult which represents the problem or null if no problem found

getExcluded

public chemaxon.checkers.util.DataExclusionList getExcluded()

Any attached data that matches this descriptor won't appear as the result of this checker. (The descriptor can be interpreted as a comma separated list of excluded values or as a regular expression for such values. This is governed by the isExclusionRegexp() property, which can be set through the setExclusionRegexp(boolean) method.)

setExcluded

public void setExcluded(chemaxon.checkers.util.DataExclusionList excluded)

isValid

public boolean isValid()

Description copied from interface: StructureChecker

Returns true if the checker's configuration is valid, false otherwise

Specified by:

isValid in interface StructureChecker

Overrides:

isValid in class AbstractStructureChecker

Returns:

true if the checker's configuration is valid, false otherwise

isExclusionRegexp

public boolean isExclusionRegexp()

Tells how to interpret the AtomLabels: A comma separated list or a regular expression. The value can be set through the setExcluded(DataExclusionList) method and retrieved through the getExcluded() method.

Returns:

true if the excluded data is a regular expression.

setExclusionRegexp

public void setExclusionRegexp(boolean value)

Sets if the descriptor of the excluded-data (AtomLabels) should be treated as a regular expression (see also: isExclusionRegexp()

hashCode

public int hashCode()

Overrides:

hashCode in class AbstractStructureChecker

equals

public boolean equals(Object obj)

Overrides:

equals in class AbstractStructureChecker