chemaxon.sss.search

Class MarkushFeature

java.lang.Object

chemaxon.sss.search.MarkushFeature

All Implemented Interfaces:

java.io.Serializable

@PublicAPI
public class MarkushFeature
extends java.lang.Object
implements java.io.Serializable

Markush feature identifier. Identifies a Markush feature in a Markush structure.

Since:

JChem 5.4

Author:

Nora Mate

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
static int	ATOMLIST Expansion type: atom list.
static int	BONDLIST Expansion type: bond list.
static int	LINKNODE Expansion type: link node.
static int	MULTIBOND Expansion type: multiple position bond.
static int	REPUNIT Expansion type: repeating unit.
static int	RGROUP Expansion type: R-grgoup.

Constructor Summary

Constructors

Constructor and Description
MarkushFeature(int... args) Constructor.
MarkushFeature(int type, int[] data) Constructor.

Method Summary

Modifier and Type	Method and Description
boolean	equals(java.lang.Object o)
int[]	getData() Returns the feature data.
int	getType() Returns the feature type.
int	hashCode()
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

RGROUP

public static final int RGROUP

Expansion type: R-grgoup.

See Also:

Constant Field Values

LINKNODE

public static final int LINKNODE

Expansion type: link node.

See Also:

Constant Field Values

REPUNIT

public static final int REPUNIT

Expansion type: repeating unit.

See Also:

Constant Field Values

ATOMLIST

public static final int ATOMLIST

Expansion type: atom list.

See Also:

Constant Field Values

BONDLIST

public static final int BONDLIST

Expansion type: bond list.

See Also:

Constant Field Values

MULTIBOND

public static final int MULTIBOND

Expansion type: multiple position bond.

See Also:

Constant Field Values

Constructor Detail

MarkushFeature

public MarkushFeature(int type,
                      int[] data)

Constructor. Sets the feature type and data. The possible type - data combinations:

• RGROUP: {R-atom union index, R-group definition index}
• LINKNODE: {link atom union index}
• REPUNIT: {RepeatingUnitSgroup sgroup index in markush}
• ATOMLIST: {list atom union index}
• BONDLIST: {list bond union bond index}
• MULTIBOND: {union bond index, MulticenterSgroup sgroup index in markush}

R-group definition index: the index returned by RgMolecule.findRgroupIndex(int).

Parameters:

type - the feature type

data - the feature data

MarkushFeature

public MarkushFeature(int... args)

Constructor. Sets the feature type and data. The first argument is the feature type, the rest of the argument list is composed to the data array. The possible type - data combinations:

• RGROUP: {R-atom union index, R-group definition index}
• LINKNODE: {link atom union index}
• REPUNIT: {RepeatingUnitSgroup sgroup index in markush}
• ATOMLIST: {list atom union index}
• BONDLIST: {list bond union bond index}
• MULTIBOND: {union bond index, MulticenterSgroup sgroup index in markush}

R-group definition index: the index returned by RgMolecule.findRgroupIndex(int).

Parameters:

args - the argument list, args[0] is the feature type, args[1], ... is the feature data list

Method Detail

equals

public boolean equals(java.lang.Object o)

Overrides:

equals in class java.lang.Object

hashCode

public int hashCode()

Overrides:

hashCode in class java.lang.Object

getType

public int getType()

Returns the feature type.

Returns:

the feature type

getData

public int[] getData()

Returns the feature data.

Returns:

the feature data

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object