Package chemaxon.standardizer.actions

Class ConvertToEnhancedStereoAction

java.lang.Object

chemaxon.standardizer.AbstractStandardizerAction

chemaxon.standardizer.actions.ConvertToEnhancedStereoAction

All Implemented Interfaces:

chemaxon.license.Licensable, StandardizerAction, PropertyChangeListener, Cloneable, EventListener

@PublicAPI
public final class ConvertToEnhancedStereoAction
extends AbstractStandardizerAction

Convert to enhanced stereo standardizer action

Since:

5.11

Field Summary

Fields

Modifier and Type	Field	Description
static String	AND
static String	OR
static String	PROPERTY_KEY_ABSOLUTE	Key of type for property change of mode
static String	PROPERTY_KEY_ABSSTEREO	Key of type for property change of mode
static String	PROPERTY_KEY_ENFORCE_ABS	Key of type for property change of mode
static String	PROPERTY_KEY_STEREO_GROUP	Key of type for property change of mode
static String	PROPERTY_KEY_TYPE	Key of type for property change of mode

Fields inherited from class chemaxon.standardizer.AbstractStandardizerAction

CONFIG_PATH_KEY, FORMAT_KEY, ID_KEY, support

Constructor Summary

Constructors

Constructor	Description
ConvertToEnhancedStereoAction(Map<String,String> params)	Initializes the action with parameters

Method Summary

Modifier and Type	Method	Description
ConvertToEnhancedStereoAction	clone()
String	getType()	Gets the type value of the action
boolean	isAbsStereo()	Gets the absolute value of the action
boolean	isEnforceAbsStereo()
void	setAbsStereo(boolean absStereo)	Sets the absoluteLegacy value of the action
void	setEnforceAbsStereo(boolean enforceAbsStereo)
void	setType(String type)	Sets the type value of the action
protected Changes	standardize1(Molecule molecule)	This method contains the current standardization mechanism.
String	toString()

Methods inherited from class chemaxon.standardizer.AbstractStandardizerAction

addPropertyChangeListener, addPropertyChangeListener, anyBooleanPropertyTrue, cloneItem, getComponents, getDescriptor, getID, isActive, isAvailable, isLicensed, isValid, propertyChange, removePropertyChangeListener, removePropertyChangeListener, setActive, setID, setLicenseEnvironment, setValid, standardize

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

AND

public static final String AND

See Also:

Constant Field Values

OR

public static final String OR

See Also:

Constant Field Values

PROPERTY_KEY_STEREO_GROUP

public static final String PROPERTY_KEY_STEREO_GROUP

Key of type for property change of mode

See Also:

Constant Field Values

PROPERTY_KEY_TYPE

public static final String PROPERTY_KEY_TYPE

Key of type for property change of mode

See Also:

Constant Field Values

PROPERTY_KEY_ABSOLUTE

public static final String PROPERTY_KEY_ABSOLUTE

Key of type for property change of mode

See Also:

Constant Field Values

PROPERTY_KEY_ABSSTEREO

public static final String PROPERTY_KEY_ABSSTEREO

Key of type for property change of mode

See Also:

Constant Field Values

PROPERTY_KEY_ENFORCE_ABS

public static final String PROPERTY_KEY_ENFORCE_ABS

Key of type for property change of mode

See Also:

Constant Field Values

Constructor Detail

ConvertToEnhancedStereoAction

public ConvertToEnhancedStereoAction(Map<String,String> params)

Initializes the action with parameters

Parameters:

params - the parameters of the action

Method Detail

setType

public void setType(String type)

Sets the type value of the action

Parameters:

type - the type value of the action

getType

public String getType()

Gets the type value of the action

Returns:

the type value of the action

setAbsStereo

public void setAbsStereo(boolean absStereo)

Sets the absoluteLegacy value of the action

Parameters:

absStereo - the absolute value of the action

isAbsStereo

public boolean isAbsStereo()

Gets the absolute value of the action

Returns:

absolute the absolute value of the action

isEnforceAbsStereo

public boolean isEnforceAbsStereo()

setEnforceAbsStereo

public void setEnforceAbsStereo(boolean enforceAbsStereo)

standardize1

protected Changes standardize1(Molecule molecule)

Description copied from class: AbstractStandardizerAction

This method contains the current standardization mechanism. Descendants needs to implement this method.
Special molecules containing more components (e.g. RgMolecule, RxnMolecule) are decomponented by the method AbstractStandardizerAction.getComponents(Molecule), and AbstractStandardizerAction.standardize1(Molecule) method is called on each component, before applied on the original molecule. If a descendant does not want this to occur, this method must be overridden.
Logs of standardization should be generated to a Logger, that can be collected by using StandardizerLogger.getLogger() method.

Specified by:

standardize1 in class AbstractStandardizerAction

Parameters:

molecule - the Molecule instance to be standardized

Returns:

the changes applied on the molecule during the standardization process

clone

public ConvertToEnhancedStereoAction clone()
                                    throws CloneNotSupportedException

Overrides:

clone in class AbstractStandardizerAction

Throws:

CloneNotSupportedException

toString

public String toString()

Overrides:

toString in class AbstractStandardizerAction