Package chemaxon.standardizer.actions
Class AliasToGroupAction
java.lang.Object
chemaxon.standardizer.AbstractStandardizerAction
chemaxon.standardizer.actions.AliasToGroupAction
- All Implemented Interfaces:
chemaxon.license.Licensable
,StandardizerAction
,PropertyChangeListener
,Cloneable
,EventListener
Alias to Group standardizer action
- Since:
- 5.11
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Field Summary
Modifier and TypeFieldDescriptionstatic final String
Property Key of the abbreviated group modificationFields inherited from class chemaxon.standardizer.AbstractStandardizerAction
CONFIG_PATH_KEY, FORMAT_KEY, ID_KEY, support
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Constructor Summary
ConstructorDescriptionAliasToGroupAction
(Map<String, String> params) Initializes the action with parameters -
Method Summary
Modifier and TypeMethodDescriptionclone()
Gets the abbreviated groups of the actionvoid
Sets the abbreviated groups of the actionprotected Changes
standardize1
(Molecule molecule) This method contains the current standardization mechanism.toString()
Methods inherited from class chemaxon.standardizer.AbstractStandardizerAction
addPropertyChangeListener, addPropertyChangeListener, anyBooleanPropertyTrue, cloneItem, getComponents, getDescriptor, getID, isActive, isAvailable, isLicensed, isValid, propertyChange, removePropertyChangeListener, removePropertyChangeListener, setActive, setID, setLicenseEnvironment, setValid, standardize
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Field Details
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ABBREV_GROUPS_KEY
Property Key of the abbreviated group modification- See Also:
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Constructor Details
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AliasToGroupAction
Initializes the action with parameters- Parameters:
params
- the parameters of the action
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Method Details
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setGroups
Sets the abbreviated groups of the action- Parameters:
groups
- the abbreviated groups of the action
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getGroups
Gets the abbreviated groups of the action- Returns:
- the abbreviated groups of the action
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standardize1
Description copied from class:AbstractStandardizerAction
This method contains the current standardization mechanism. Descendants needs to implement this method.
Special molecules containing more components (e.g.RgMolecule
,RxnMolecule
) are decomponented by the methodAbstractStandardizerAction.getComponents(Molecule)
, andAbstractStandardizerAction.standardize1(Molecule)
method is called on each component, before applied on the original molecule. If a descendant does not want this to occur, this method must be overridden.
Logs of standardization should be generated to aLogger
, that can be collected by usingStandardizerLogger.getLogger()
method.- Specified by:
standardize1
in classAbstractStandardizerAction
- Parameters:
molecule
- theMolecule
instance to be standardized- Returns:
- the changes applied on the molecule during the standardization process
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clone
- Overrides:
clone
in classAbstractStandardizerAction
- Throws:
CloneNotSupportedException
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toString
- Overrides:
toString
in classAbstractStandardizerAction
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