Package com.chemaxon.descriptors.fingerprints.pf2d

Class PfTableReader

java.lang.Object

com.chemaxon.descriptors.db.MDTableReader<FloatVectorDescriptor>

com.chemaxon.descriptors.fingerprints.pf2d.PfTableReader

@Beta
@PublicApi
public abstract class PfTableReader
extends MDTableReader<FloatVectorDescriptor>

MDTable reader for 2D pharmacophore fingerprints.

Please note that this interface is marked with @Beta annotation, so it can be subject of incompatible changes or removal in later releases.

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static interface	PfTableReader.Factory	Factory class.

Constructor Summary

Constructors

Constructor	Description
PfTableReader()

Method Summary

Modifier and Type	Method	Description
static PfTableReader	createNewReader(String xmlConfig)	Create a PfTableReader from the xml configuration string.
abstract PfGenerator	getDescriptorGenerator()	Associated descriptor generator.

Methods inherited from class com.chemaxon.descriptors.db.MDTableReader

getStandardizerWrapper, getXmlConfig, read

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

PfTableReader

public PfTableReader()

Method Details

createNewReader

public static PfTableReader createNewReader(String xmlConfig)

Create a PfTableReader from the xml configuration string.

Parameters:

xmlConfig - xml config

Returns:

a PfTableReader implementation

Throws:

IllegalArgumentException - invalid xml string

getDescriptorGenerator

public abstract PfGenerator getDescriptorGenerator()

Description copied from class: MDTableReader

Associated descriptor generator.

Associated generator is compatible with the read descriptors created by method MDTableReader.read(byte[]). Note that the DescriptorSerializer exposed by the returned generator is not compatible with the binary form represented by this reader.

Specified by:

getDescriptorGenerator in class MDTableReader<FloatVectorDescriptor>

Returns:

Associated generator