Constant Field Values

Contents

• chemaxon.calculations.*
• chemaxon.checkers.*
• chemaxon.clustering.*
• chemaxon.core.*
• chemaxon.descriptors.*
• chemaxon.fixers.*
• chemaxon.formats.*
• chemaxon.jchem.*
• chemaxon.jep.*
• chemaxon.license.*
• chemaxon.marvin.*
• chemaxon.naming.*
• chemaxon.pharmacophore.*
• chemaxon.reaction.*
• chemaxon.sss.*
• chemaxon.standardizer.*
• chemaxon.struc.*
• chemaxon.util.*
• com.chemaxon.*

chemaxon.calculations.*

chemaxon.calculations.dipole.DipoleResult

Modifier and Type	Constant Field	Value
protected static final double	DEBYE_TO_EA	0.20822678

chemaxon.calculations.nmr.NMRCalculator

Modifier and Type	Constant Field	Value
public static final java.lang.String	C_SHIFT_PROP_NAME	"13C"
public static final java.lang.String	H_SHIFT_PROP_NAME	"1H"

chemaxon.calculations.stereo.Stereochemistry

Modifier and Type	Constant Field	Value
public static final int	EVEN	2
public static final int	ODD	1

chemaxon.checkers.*

chemaxon.checkers.AbbreviatedGroupChecker

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_CONTRACTED	"contracted"
public static final java.lang.String	PROPERTY_KEY_EXCLUDED	"excluded"
public static final java.lang.String	PROPERTY_KEY_EXPANDED	"expanded"
public static final java.lang.String	PROPERTY_KEY_SEARCH_CONTRACTED	"searchContracted"
public static final java.lang.String	PROPERTY_KEY_SEARCH_EXCLUDED	"searchExcluded"
public static final java.lang.String	PROPERTY_KEY_SEARCH_EXPANDED	"searchExpanded"

chemaxon.checkers.AromaticityErrorChecker

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_AROM_TYPE	"aromType"
public static final java.lang.String	PROPERTY_KEY_TYPE	"type"

chemaxon.checkers.AtomQueryPropertyChecker

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_AROMATCITY	"aromaticity"
public static final java.lang.String	PROPERTY_KEY_AROMATICITY_CHECKING	"aromaticityChecking"
public static final java.lang.String	PROPERTY_KEY_CONNECTION_COUNT	"connectionCount"
public static final java.lang.String	PROPERTY_KEY_CONNECTION_COUNT_CHECKING	"conncetionCountChecking"
public static final java.lang.String	PROPERTY_KEY_EXPLICIT_CONNECTION_COUNT	"explicitConnectionCount"
public static final java.lang.String	PROPERTY_KEY_EXPLICIT_CONNECTION_COUNT_CHECKING	"explicitConnectionCountChecking"
public static final java.lang.String	PROPERTY_KEY_HYDROGEN_COUNT	"hydrogenCount"
public static final java.lang.String	PROPERTY_KEY_HYDROGEN_COUNT_CHECKING	"hydrogenCountChecking"
public static final java.lang.String	PROPERTY_KEY_IMPLICIT_HYDROGEN_COUNT	"implicitHydrogenCount"
public static final java.lang.String	PROPERTY_KEY_IMPLICIT_HYDROGEN_COUNT_CHECKING	"implicitHydrogenCountChecking"
public static final java.lang.String	PROPERTY_KEY_RING_BOND_COUNT	"ringBondCount"
public static final java.lang.String	PROPERTY_KEY_RING_BOND_COUNT_CHECKING	"ringBondCountChecking"
public static final java.lang.String	PROPERTY_KEY_RING_COUNT	"ringCount"
public static final java.lang.String	PROPERTY_KEY_RING_COUNT_CHECKING	"ringCountChecking"
public static final java.lang.String	PROPERTY_KEY_SMALLEST_RING_SIZE	"smallestRingSize"
public static final java.lang.String	PROPERTY_KEY_SMALLEST_RING_SIZE_CHECKING	"smallestRingSizeChecking"
public static final java.lang.String	PROPERTY_KEY_SUBSTITUTION_COUNT	"substitutionCount"
public static final java.lang.String	PROPERTY_KEY_SUBSTITUTION_COUNT_CHECKING	"substitutionCountChecing"
public static final java.lang.String	PROPERTY_KEY_UNSATURATION	"unsaturation"
public static final java.lang.String	PROPERTY_KEY_UNSATURATION_CHECKING	"unsaturationChecking"

chemaxon.checkers.AtomTypeChecker

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_TYPES	"types"

chemaxon.checkers.AttachedDataChecker

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_EXCLUDED	"excluded"
public static final java.lang.String	PROPERTY_KEY_IS_EXCLUSION_REGEXP	"isExclusionRegexp"
public static final java.lang.String	PROPERTY_KEY_SEARCH_EXCLUDED	"searchExcluded"
public static final java.lang.String	PROPERTY_KEY_SEARCH_WITH_REGEXP_EXCLUSION	"searchWithRegexpExclusion"

chemaxon.checkers.ExplicitHydrogenChecker

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_BRIDGEHEAD	"bridgehead"
public static final java.lang.String	PROPERTY_KEY_CHARGED	"charged"
public static final java.lang.String	PROPERTY_KEY_H_CONNECTED	"hconnected"
public static final java.lang.String	PROPERTY_KEY_ISOTOPIC	"isotopic"
public static final java.lang.String	PROPERTY_KEY_LONELY	"lonely"
public static final java.lang.String	PROPERTY_KEY_MAPPED	"mapped"
public static final java.lang.String	PROPERTY_KEY_POLYMER_END_GROUP	"polymerendgroup"
public static final java.lang.String	PROPERTY_KEY_RADICAL	"radical"
public static final java.lang.String	PROPERTY_KEY_SEARCH_BRIDGEHEAD	"searchBridgehead"
public static final java.lang.String	PROPERTY_KEY_SEARCH_CHARGED	"searchCharged"
public static final java.lang.String	PROPERTY_KEY_SEARCH_H_CONNECTED	"searchHconnected"
public static final java.lang.String	PROPERTY_KEY_SEARCH_ISOTOPIC	"searchIsotopic"
public static final java.lang.String	PROPERTY_KEY_SEARCH_LONELY	"searchLonely"
public static final java.lang.String	PROPERTY_KEY_SEARCH_MAPPED	"searchMapped"
public static final java.lang.String	PROPERTY_KEY_SEARCH_POLYMER_END_GROUP	"searchPolymerendgroup"
public static final java.lang.String	PROPERTY_KEY_SEARCH_RADICAL	"searchRadical"
public static final java.lang.String	PROPERTY_KEY_SEARCH_SGROUP	"searchSgroup"
public static final java.lang.String	PROPERTY_KEY_SEARCH_SGROUP_END	"searchSgroupend"
public static final java.lang.String	PROPERTY_KEY_SEARCH_VALENCE_ERROR	"searchValenceerror"
public static final java.lang.String	PROPERTY_KEY_SEARCH_WEDGED	"searchWedged"
public static final java.lang.String	PROPERTY_KEY_SGROUP	"sgroup"
public static final java.lang.String	PROPERTY_KEY_SGROUP_END	"sgroupend"
public static final java.lang.String	PROPERTY_KEY_VALENCE_ERROR	"valenceerror"
public static final java.lang.String	PROPERTY_KEY_WEDGED	"wedged"

chemaxon.checkers.PseudoAtomChecker

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_EXCLUDED	"excluded"
public static final java.lang.String	PROPERTY_KEY_SEARCH_EXCLUDED	"searchExcluded"

chemaxon.checkers.RatomChecker

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_SEARCH_ALL	"searchAll"
public static final java.lang.String	PROPERTY_KEY_SEARCH_DISCONNECTED	"searchDisconnected"
public static final java.lang.String	PROPERTY_KEY_SEARCH_GENERIC	"searchGeneric"
public static final java.lang.String	PROPERTY_KEY_SEARCH_LINKER	"searchLinker"
public static final java.lang.String	PROPERTY_KEY_SEARCH_NESTED	"searchNested"

chemaxon.checkers.RingStrainErrorChecker

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_DETECT_CUMULATED_DOUBLE_BONDS	"detectCumulatedDoubleBonds"
public static final java.lang.String	PROPERTY_KEY_DETECT_TRANS_DOUBLE_BONDS	"detectTransDoubleBonds"
public static final java.lang.String	PROPERTY_KEY_DETECT_TRIPLE_BONDS	"detectTripleBonds"

chemaxon.checkers.StructureChecker

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_VALID	"VALID"

chemaxon.checkers.StructureCheckerDescriptor

Modifier and Type	Constant Field	Value
public static final java.lang.String	ACTIONSTRING_TOKEN	"actionStringToken"
public static final java.lang.String	CUSTOM_NAME	"customName"
public static final java.lang.String	DESCRIPTION	"description"
public static final java.lang.String	EDITOR_CLASS_NAME	"editorClassName"
public static final java.lang.String	FIX_MODE	"fixMode"
public static final java.lang.String	FIXER_CLASS_NAME	"fixerClassName"
public static final java.lang.String	HELP_TEXT	"helpText"
public static final java.lang.String	ICON_PATH	"iconPath"
public static final java.lang.String	LOCAL_MENU_NAME	"localMenuName"
public static final java.lang.String	MORE_ERROR_MESSAGE	"moreErrorMessage"
public static final java.lang.String	NAME	"name"
public static final java.lang.String	NO_ERROR_MESSAGE	"noErrorMessage"
public static final java.lang.String	ONE_ERROR_MESSAGE	"oneErrorMessage"
public static final java.lang.String	SEVERITY	"severity"

chemaxon.checkers.StructureCheckerFactory

Modifier and Type	Constant Field	Value
public static final java.lang.String	CHECKERCONFIG_XML	"checkerconfig.xml"
public static final java.lang.String	DEFAULT	"default"
public static final java.lang.String	DEFAULT_CONFIGURATION_PATH	"/chemaxon/checkers/resource/defaultcheckerconfig.xml"
public static final java.lang.String	DEFAULT_CONFIGURATION_SCHEMA	"/chemaxon/checkers/resource/checkerconfig.xsd"
public static final java.lang.String	USER_DEFINED_CHECKERCONFIG_XML	"userdefinedcheckers.xml"

chemaxon.checkers.StructureCheckerHelper

Modifier and Type	Constant Field	Value
public static final double	MAXIMAL_DISTANCE_LIMIT	1.8479999999999999
public static final double	MINIMAL_ATOM_DISTANCE_LIMIT	0.6160000000000001
public static final double	MINIMAL_DISTANCE_LIMIT	0.9239999999999999

chemaxon.checkers.ValenceErrorChecker

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_TRADITIONAL_N_ALLOWED	"allowTraditionalNitrogen"

chemaxon.checkers.ValencePropertyChecker

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_DEFAULT_VALENCE	"defaultValence"
public static final java.lang.String	PROPERTY_KEY_NON_DEFAULT_VALENCE	"nonDefaultValence"
public static final java.lang.String	PROPERTY_KEY_SEARCH_DEFAULT_VALENCE	"searchDefaultValence"
public static final java.lang.String	PROPERTY_KEY_SEARCH_NON_DEFAULT_VALENCE	"searchNonDefaultValence"

chemaxon.checkers.result.ConvertConstants

Modifier and Type	Constant Field	Value
public static final java.lang.String	ATOM_ATOM_MAP	"atomAtomMap"
public static final java.lang.String	BOND_BOND_MAP	"bondBondMap"
public static final java.lang.String	SGROUP_SGROUP_MAP	"sgroupSgroupMap"

chemaxon.checkers.runner.configuration.reader.ConfigurationReader

Modifier and Type	Constant Field	Value
public static final java.lang.String	DEFAULT_CHECKERS_CONFIG_PATH	"/chemaxon/marvin/sketch/swing/modules/checker/resources/default.xml"
public static final java.lang.String	DEFAULT_USER_CHECKER_FILENAME	"checkerconfig.xml"

chemaxon.checkers.runner.configuration.reader.XMLBasedConfigurationReader

Modifier and Type	Constant Field	Value
public static final java.lang.String	DEFAULT_CONFIGURATION_SCHEMA	"/chemaxon/checkers/runner/configuration/reader/resource/checkerconfiguration.xsd"

chemaxon.clustering.*

chemaxon.clustering.LibraryMCS

Modifier and Type	Constant Field	Value
public static final int	ATOM_COUNT_UPPER_BOUND	50
public static final int	DEFAULT_ALLOWED_LEVEL_COUNT	10
public static final boolean	DEFAULT_ATOM_TYPE_MATCH	true
public static final boolean	DEFAULT_BOND_TYPE_MATCH	true
public static final boolean	DEFAULT_CHARGE_MATCH	true
public static final boolean	DEFAULT_ISOTOPE_MATCH	true
public static final boolean	DEFAULT_KEEP_RINGS_MODE	true
public static final int	DEFAULT_MIN_MCS_SIZE	9
public static final boolean	DEFAULT_RADICAL_MATCH	true
public static final int	DEFAULT_REQUIRED_CLUSTER_COUNT	1
public static final int	MAX_LEVEL_COUNT	100
public static final int	TERMINATION_CANCEL	5
public static final int	TERMINATION_CLUSTER_COUNT	3
public static final int	TERMINATION_ERROR	1
public static final int	TERMINATION_LEVEL_COUNT	2
public static final int	TERMINATION_MCS_SIZE_LIMIT	4
public static final int	TERMINATION_SAME_PARAMETERS	6
public static final int	TERMINATION_STEP_NOT_ALLOWED	7
public static final int	TERMINATION_UNKNOWN	0

chemaxon.clustering.Ward

Modifier and Type	Constant Field	Value
public static final int	ONLY_CLUSTERING	2
public static final int	ONLY_RNN	1
public static final int	RNN_AND_CLUSTERING	0

chemaxon.core.*

chemaxon.core.ChemConst

Modifier and Type	Constant Field	Value
public static final int	Ac	89
public static final int	Ag	47
public static final int	Al	13
public static final int	Am	95
public static final int	Ar	18
public static final int	As	33
public static final int	At	85
public static final int	Au	79
public static final int	B	5
public static final int	Ba	56
public static final int	Be	4
public static final int	Bh	107
public static final int	Bi	83
public static final int	Bk	97
public static final int	Br	35
public static final int	C	6
public static final int	Ca	20
public static final int	Cd	48
public static final int	Ce	58
public static final int	Cf	98
public static final int	Cl	17
public static final int	Cm	96
public static final int	Cn	112
public static final int	Co	27
public static final int	Cr	24
public static final int	Cs	55
public static final int	Cu	29
public static final int	Db	105
public static final int	Ds	110
public static final int	Dy	66
public static final int	ELEMENT_COUNT	118
public static final int	Er	68
public static final int	Es	99
public static final int	Eu	63
public static final int	F	9
public static final int	Fe	26
public static final int	Fl	114
public static final int	Fm	100
public static final int	Fr	87
public static final int	Ga	31
public static final int	Gd	64
public static final int	Ge	32
public static final int	H	1
public static final int	He	2
public static final int	Hf	72
public static final int	Hg	80
public static final int	Ho	67
public static final int	Hs	108
public static final int	I	53
public static final int	In	49
public static final int	Ir	77
public static final int	K	19
public static final int	Kr	36
public static final int	La	57
public static final int	Li	3
public static final int	Lr	103
public static final int	Lu	71
public static final int	Lv	116
public static final int	Mc	115
public static final int	Md	101
public static final int	Mg	12
public static final int	Mn	25
public static final int	Mo	42
public static final int	Mt	109
public static final int	N	7
public static final int	Na	11
public static final int	Nb	41
public static final int	Nd	60
public static final int	Ne	10
public static final int	Nh	113
public static final int	Ni	28
public static final int	No	102
public static final int	Np	93
public static final int	O	8
public static final int	Og	118
public static final int	Os	76
public static final int	P	15
public static final int	Pa	91
public static final int	Pb	82
public static final int	Pd	46
public static final int	Pm	61
public static final int	Po	84
public static final int	Pr	59
public static final int	Pt	78
public static final int	Pu	94
public static final int	Ra	88
public static final int	Rb	37
public static final int	Re	75
public static final int	Rf	104
public static final int	Rg	111
public static final int	Rh	45
public static final int	Rn	86
public static final int	Ru	44
public static final int	S	16
public static final int	Sb	51
public static final int	Sc	21
public static final int	Se	34
public static final int	Sg	106
public static final int	Si	14
public static final int	Sm	62
public static final int	Sn	50
public static final int	Sr	38
public static final int	Ta	73
public static final int	Tb	65
public static final int	Tc	43
public static final int	Te	52
public static final int	Th	90
public static final int	Ti	22
public static final int	Tl	81
public static final int	Tm	69
public static final int	Ts	117
public static final int	U	92
public static final int	V	23
public static final int	W	74
public static final int	Xe	54
public static final int	Y	39
public static final int	Yb	70
public static final int	Zn	30
public static final int	Zr	40

chemaxon.core.util.BondTable

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_VALUE	-1

chemaxon.descriptors.*

chemaxon.descriptors.CDParameters

Modifier and Type	Constant Field	Value
public static final int	BINARY_DESCRIPTOR	0
public static final int	FLOAT_DESCRIPTOR	2
public static final int	INTEGER_DESCRIPTOR	1

chemaxon.descriptors.CFParameters

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_BITS_SET	2
public static final int	DEFAULT_BOND_COUNT	7
public static final int	DEFAULT_LENGTH	1024

chemaxon.descriptors.ECFPParameters

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_DIAMETER	4
public static final int	DEFAULT_LENGTH	1024

chemaxon.descriptors.MDHypothesisCreator

Modifier and Type	Constant Field	Value
public static final java.lang.String	defaultTypeName	"Minimum"

chemaxon.descriptors.MDParameters

Modifier and Type	Constant Field	Value
public static final float	DEFAULT_ASYMMETRY_FACTOR	0.0f
public static final int	DEFAULT_OUTPUT_PRECISION	2
public static final float	DEFAULT_SCALE_FACTOR	1.0f
public static final float	DEFAULT_WEIGHT	1.0f

chemaxon.descriptors.MetricsType

Modifier and Type	Constant Field	Value
public static final java.lang.String	SEPARATOR	":"

chemaxon.descriptors.PFParameters

Modifier and Type	Constant Field	Value
public static final float	DEFAULT_FUZZINESS_FACTOR	1.0f
public static final float	DEFAULT_FUZZY_CUTOFF	10.0f
public static final int	DEFAULT_FUZZY_LOWER_BOUND	1
public static final int	DEFAULT_RESOLUTION	1
public static final java.lang.String	DEFAULT_XML_CONFIG	"<?xml version=\"1.0\" encoding=\"UTF-8\"?>\n<!-- Pharmacophore configuration file -->\n<PharmacophoreFingerprintConfiguration Version =\"0.3\" schemaLocation=\"pharmacophores.xsd\">\n <PharmacophoreDefinition>\n <Search StereoCareChecking=\"false\"/>\n <Mols>\n <Mol ID=\"pos\" Structure=\"[*+]\"/>\n <Mol ID=\"nitro\" Structure=\"[O:2]~[N:1]=[O:3]\"/>\n <Mol ID=\"amine\" Structure=\"C[N:1]\"/>\n <Mol ID=\"tertamine\" Structure=\"C[N:1](C)C\"/>\n <Mol ID=\"aniline\" Structure=\"c[N:1]\"/>\n <Mol ID=\"amide\" Structure=\"[#7:1][C,P,S:2]=O\"/>\n <Mol ID=\"hydrazine\" Structure=\"NN\"/>\n <Mol ID=\"phenylhydrazine\" Structure=\"c[N:1][N:2]\"/>\n <Mol ID=\"hydrazide\" Structure=\"[#7:1]NC=O\"/>\n <Mol ID=\"amidine\" Structure=\"[#7:2][C,P,S:1]=[N:3]\"/>\n <Mol ID=\"neg\" Structure=\"[*-]\"/>\n <Mol ID=\"carbox\" Structure=\"[H][O:3][C:1]=[O:2]\"/>\n <Mol ID=\"carboxylate\" Structure=\"[O-3][C:1]=[O:2]\"/>\n <Mol ID=\"sulfonyl\" Structure=\"[H][O:3][S:1](=[O:2])=[O:4]\"/>\n <Mol ID=\"sulfonate\" Structure=\"[O-:3][S:1](=[O:4])=[O:2]\"/>\n <Mol ID=\"phosphonyl\" Structure=\"[H][O:4][P:1]([O:2])=[O:3]\"/>\n <Mol ID=\"phosphonate\" Structure=\"[O:4][P:1]([O-:2])=[O:3]\"/>\n <Mol ID=\"arom\" Structure=\"[*;a]\"/>\n <Mol ID=\"cx\" Structure=\"[C,F,Cl,Br,I,At]\"/>\n <Mol ID=\"nos\" Structure=\"[#7,#8,#16]\"/>\n <Mol ID=\"pyr\" Structure=\"[nX3]\"/>\n <Mol ID=\"qh\" Structure=\"[!#1!#6:1][H]\"/>\n </Mols>\n <Pharmacophores>\n <AtomSet ID=\"Aromatic\" Symbol=\"r\">arom</AtomSet>\n <AtomSet ID=\"Cationic\" Symbol=\"+\">\n <![CDATA[ !neg && ((pos && !nitro:1) || ((amine:1 || hydrazine || amidine:2,3) && !(tertamine:1 || amide:1 || nitro:1 || aniline:1 || phenylhydrazine:2))) ]]>\n </AtomSet>\n <AtomSet ID=\"Anionic\" Symbol=\"-\">\n <![CDATA[ !pos && ((neg && !nitro:2,3) || carbox:2,3 || carboxylate:2,3 || sulfonyl:2,3,4 || sulfonate || phosphonyl:2,3,4 || phosphonate) ]]>\n </AtomSet>\n <AtomSet ID=\"HydrogenBondDonor\" Symbol=\"d\">\n <![CDATA[ qh:1 || tertamine:1 && !{Anionic}]]>\n </AtomSet>\n <AtomSet ID=\"HydrogenBondAcceptor\" Symbol=\"a\">\n <![CDATA[ nos && !tertamine:1 && !pyr && !amide:1,2 && !aniline:1 && !sulfonyl:1 && !sulfonate:1 && !{Cationic} && !nitro:1 ]]>\n </AtomSet>\n <AtomSet ID=\"Hydrophobic\" Symbol=\"h\">\n <![CDATA[ cx && !{Aromatic} && !{Cationic} && !{Anionic} && !{HydrogenBondDonor} && !{HydrogenBondAcceptor} ]]>\n </AtomSet>\n </Pharmacophores>\n <PharmacophoreFingerprintParameters MinimalDistance=\"1\" MaximalDistance=\"10\" />\n </PharmacophoreDefinition>\n <StandardizerConfiguration Version =\"0.1\">\n <Actions> \n <Removal ID=\"keepOne\" Method=\"keepLargest\" Measure=\"molMass\"/>\n <Action ID=\"aromatize\" Act=\"aromatize\"/>\n </Actions>\n </StandardizerConfiguration>\n <ScreeningConfiguration>\n <PharmacophorePointColors>\n <Color Symbol=\"+\" Value=\"red\"/>\n <Color Symbol=\"-\" Value=\"blue\"/>\n <Color Symbol=\"r\" Value=\"green\"/>\n <Color Symbol=\"h\" Value=\"black\"/>\n <Color Symbol=\"d\" Value=\"navy\"/>\n <Color Symbol=\"a\" Value=\"maroon\"/>\n <Color Symbol=\"a/d\" Value=\"purple\"/>\n <Color Symbol=\"+/d\" Value=\"lime\"/>\n <Color Symbol=\"-/a\" Value=\"aqua\"/>\n <Color Symbol=\"empty\" Value=\"gray\"/>\n <Color Symbol=\"other\" Value=\"fuchsia\"/>\n </PharmacophorePointColors> \n <ParametrizedMetrics>\n <ParametrizedMetric Name=\"Tanimoto\" ActiveFamily=\"Generic\" \n Metric=\"Tanimoto\" Threshold=\"0.2\"/>\n <ParametrizedMetric Name=\"Euclidean\" ActiveFamily=\"Generic\" \n Metric=\"Euclidean\" Threshold=\"15\" />\n <ParametrizedMetric Name=\"Tversky\" ActiveFamily=\"Generic\"\n Metric=\"Tversky\" Threshold=\"0.5\" TverskyAlpha=\"1\" TverskyBeta=\"1\"/>\n <ParametrizedMetric Name=\"UnityTversky\" ActiveFamily=\"Generic\"\n Metric=\"Tversky\" Threshold=\"0.5\" TverskyAlpha=\"0.\" TverskyBeta=\"0.\"/>\n </ParametrizedMetrics>\n </ScreeningConfiguration>\n</PharmacophoreFingerprintConfiguration>\n"

chemaxon.descriptors.RFParameters

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_BITS_SET	2
public static final int	DEFAULT_BOND_COUNT	6
public static final int	DEFAULT_LENGTH	2048

chemaxon.descriptors.scalars.HBParameters

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_PH	7

chemaxon.descriptors.scalars.LDParameters

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_LOWER_BOUND	0
public static final int	DEFAULT_PH	7
public static final int	DEFAULT_STEP_SIZE	1
public static final int	DEFAULT_UPPER_BOUND	14

chemaxon.fixers.*

chemaxon.fixers.StructureFixerDescriptor

Modifier and Type	Constant Field	Value
public static final java.lang.String	ACTIONSTRING_TOKEN	"actionStringToken"
public static final int	DEFAULT_PRIORITY	50
public static final java.lang.String	DESCRIPTION	"description"
public static final int	HIGH_PRIORITY	75
public static final int	HIGHEST_PRIORITY	2147483647
public static final int	LOW_PRIORITY	25
public static final int	LOWEST_PRIORITY	-2147483647
public static final java.lang.String	NAME	"name"
public static final java.lang.String	PRIORITY	"priority"

chemaxon.fixers.StructureFixerFactory

Modifier and Type	Constant Field	Value
public static final java.lang.String	FIXERFACTORYCONFIG_XML	"fixerfactoryconfig.xml"

chemaxon.formats.*

chemaxon.formats.MFileFormat

Modifier and Type	Constant Field	Value
public static final long	F_ARCHIVE	128L
public static final long	F_BINARY	8L
public static final long	F_COORDS	1024L
public static final long	F_EXPORT	1L
public static final long	F_GRAPHICS	256L
public static final long	F_IMAGE	512L
public static final long	F_IMPORT	2L
public static final long	F_MIXED	8192L
public static final long	F_MOLECULE	32L
public static final long	F_MULTIPLE_RECORDS_LEGAL	2048L
public static final long	F_MULTIPLE_RECORDS_POSSIBLE	4096L
public static final long	F_OBJECT	16L
public static final long	F_REACTION	64L
public static final long	F_RECOGNIZER	4L
public static final long	F_SINGLE_LINE	65536L
public static final long	F_USER_DEFINED	32768L
public static final long	F_XML	16384L

chemaxon.formats.MFileFormatUtil

Modifier and Type	Constant Field	Value
public static final int	MOLMOVIE	2
public static final int	MULTISET	1
public static final int	NOMOLMOVIE	4

chemaxon.formats.MolExporter

Modifier and Type	Constant Field	Value
public static final int	C_CLOSE_STREAM	1
public static final int	C_FLUSH_STREAM	2
public static final int	MULTIPLE	2
public static final int	TEXT	1

chemaxon.formats.recognizer.AbbrevGroupRecognizer

Modifier and Type	Constant Field	Value
public static final int	CAN_BE	1
public static final int	NO	0
public static final int	SURE	2

chemaxon.formats.recognizer.PDBRecognizer

Modifier and Type	Constant Field	Value
public static final int	CAN_BE	1
public static final int	NO	0
public static final int	SURE	2

chemaxon.jchem.*

chemaxon.jchem.db.CacheRegistrationUtil

Modifier and Type	Constant Field	Value
public static final java.lang.String	CACHE_REGISTRATION_SENSITIVITY_EXCEPTION	"EXCEPTION"
public static final java.lang.String	CACHE_REGISTRATION_SENSITIVITY_LOG	"LOG"
public static final java.lang.String	CACHE_REGISTRATION_SENSITIVITY_NONE	"NONE"
public static final java.lang.String	PROP_CACHE_REGISTRATION_SENSITIVITY	"cache.registration_sensitivity"

chemaxon.jchem.db.DatabaseConstants

Modifier and Type	Constant Field	Value
public static final int	ACCESS	4
public static final java.lang.String	ACCESS_DRIVER	"sun.jdbc.odbc.JdbcOdbcDriver"
public static final java.lang.String	ACCESS_TYPE_NAME	"ACCESS"
public static final java.lang.String	ACCESS_URL_EXAMPLE	"jdbc:odbc:mydatasource"
public static final java.lang.String	ACCESS_URL_TEMPLATE	"jdbc:odbc[:odbc data source][;options]"
public static final int	COMPOSITE	10
public static final java.lang.String	COMPOSITE_DRIVER	"cs.jdbc.driver.CompositeDriver"
public static final java.lang.String	COMPOSITE_TYPE_NAME	"COMPOSITE"
public static final java.lang.String	COMPOSITE_URL_EXAMPLE	"jdbc:compositesw:[email protected]:9401?domain=composite&dataSource=virtualdb"
public static final java.lang.String	COMPOSITE_URL_TEMPLATE	"jdbc:compositesw:[email protected][host][:port]?domain=<domain name>&dataSource=<database>"
public static final int	DB2	6
public static final java.lang.String	DB2_DRIVER	"com.ibm.db2.jcc.DB2Driver"
public static final java.lang.String	DB2_TYPE_NAME	"DB2"
public static final java.lang.String	DB2_URL_EXAMPLE	"jdbc:db2://localhost:50000/mydb"
public static final java.lang.String	DB2_URL_TEMPLATE	"jdbc:db2://[host][:port]/<database>"
public static final int	DEFAULT_BATCH_SIZE	30
public static final int	DEFAULT_COMMIT_INTERVAL	50
public static final int	DERBY	9
public static final java.lang.String	DERBY_DRIVER	"org.apache.derby.jdbc.EmbeddedDriver"
public static final java.lang.String	DERBY_TYPE_NAME	"APACHE DERBY"
public static final java.lang.String	DERBY_URL_EXAMPLE	"jdbc:derby:/c:/databases/mydb;create=true"
public static final java.lang.String	DERBY_URL_TEMPLATE	"jdbc:derby:[subprotocol]:<database with path>[;create=true][;options]"
public static final int	HSQLDB	8
public static final java.lang.String	HSQLDB_DRIVER	"org.hsqldb.jdbcDriver"
public static final java.lang.String	HSQLDB_TYPE_NAME	"HSQL"
public static final java.lang.String	HSQLDB_URL_EXAMPLE	"jdbc:hsqldb:hsql://localhost/"
public static final java.lang.String	HSQLDB_URL_TEMPLATE	"jdbc:hsqldb:hsql://[host][:port]/[database]"
public static final int	INTERBASE	5
public static final java.lang.String	INTERBASE_DRIVER	"interbase.interclient.Driver"
public static final java.lang.String	INTERBASE_TYPE_NAME	"INTERBASE"
public static final java.lang.String	INTERBASE_URL_EXAMPLE	"jdbc:interbase://localhost/c:/interbase/interbasedb.gdb"
public static final java.lang.String	INTERBASE_URL_TEMPLATE	"jdbc:interbase:<path to interbase data file (.gdb file)>"
public static final int	MSSQL	2
public static final java.lang.String	MSSQL_DRIVER	"com.microsoft.jdbc.sqlserver.SQLServerDriver"
public static final java.lang.String	MSSQL_URL_EXAMPLE	"jdbc:microsoft:sqlserver://localhost:1433;DatabaseName=mydb;selectMethod=cursor"
public static final java.lang.String	MSSQL_URL_TEMPLATE	"jdbc:microsoft:sqlserver://[host][:port][;databaseName=database][;options]"
public static final int	MSSQL2005	2
public static final java.lang.String	MSSQL2005_DRIVER	"com.microsoft.sqlserver.jdbc.SQLServerDriver"
public static final java.lang.String	MSSQL2005_TYPE_NAME	"MICROSOFT SQL SERVER"
public static final java.lang.String	MSSQL2005_URL_EXAMPLE	"jdbc:sqlserver://localhost:1433;databaseName=mydb;selectMethod=cursor"
public static final java.lang.String	MSSQL2005_URL_TEMPLATE	"jdbc:sqlserver://[host][:port][;databaseName=database][;options]"
public static final int	MYSQL	3
public static final java.lang.String	MYSQL_DRIVER	"org.mariadb.jdbc.Driver"
public static final java.lang.String	MYSQL_TYPE_NAME	"MYSQL"
public static final java.lang.String	MYSQL_URL_EXAMPLE	"jdbc:mysql://localhost:3306/mydb?useCursorFetch=true&defaultFetchSize=1000"
public static final java.lang.String	MYSQL_URL_TEMPLATE	"jdbc:mysql://[host][:port]/<database>[?options]"
public static final int	ORACLE	1
public static final java.lang.String	ORACLE_DRIVER	"oracle.jdbc.OracleDriver"
public static final java.lang.String	ORACLE_TYPE_NAME	"ORACLE"
public static final java.lang.String	ORACLE_URL_EXAMPLE	"jdbc:oracle:thin:@localhost:1521:XE"
public static final java.lang.String	ORACLE_URL_TEMPLATE	"jdbc:oracle:thin:@[host][:port]:<SID>"
public static final java.lang.String	POSGRESQL_DRIVER	"org.postgresql.Driver"
public static final java.lang.String	POSGRESQL_URL_EXAMPLE	"jdbc:postgresql://localhost:5432/mydb"
public static final java.lang.String	POSGRESQL_URL_TEMPLATE	"jdbc:postgresql://[host][:port]/<database>"
public static final int	POSTGRESQL	7
public static final java.lang.String	POSTGRESQL_TYPE_NAME	"POSTGRESQL"
public static final int	UNKNOWN	0
public static final java.lang.String	UNKNWON_TYPE_NAME	"UNKNOWN"

chemaxon.jchem.db.DatabaseProperties

Modifier and Type	Constant Field	Value
public static final java.lang.String	DEFAULT_PROPERTY_TABLE	"JChemProperties"
public static final java.lang.String	MD_PROPERTY_PREFIX	"MD"
public static final java.lang.String	NAME_COLUMN	"prop_name"
public static final java.lang.String	PROP_READONLY_DATABASE_NAME	"database.isreadonly"
public static final java.lang.String	VALUE_COLUMN	"prop_value"
public static final java.lang.String	VALUE_COLUMN_EXT	"prop_value_ext"

chemaxon.jchem.db.JChemSearch

Modifier and Type	Constant Field	Value
public static final int	APPEND_TO_RESULT_TABLE	2
public static final int	CREATE_OR_REPLACE_RESULT_TABLE	1
public static final int	MAXIMAL_ACCEPTEDSEARCHTIME_MINUTES	10
public static final int	NO_ORDERING	0
public static final int	NO_RESULT_TABLE	0
public static final int	ORDERING_BY_FILTER_ID_LIST	3
public static final int	ORDERING_BY_ID	1
public static final int	ORDERING_BY_ID_OR_SIMILARITY	2
public static final int	RUN_MODE_ASYNCH_COMPLETE	1
public static final int	RUN_MODE_ASYNCH_PROGRESSIVE	2
public static final int	RUN_MODE_SYNCH_COMPLETE	0

chemaxon.jchem.db.MDTableHandler

Modifier and Type	Constant Field	Value
public static final java.lang.String	MD_PROPERTY_COMMENT	"Comment"
public static final java.lang.String	MD_PROPERTY_CONF_PREFIX	"CONF"
public static final java.lang.String	MD_PROPERTY_SETTINGS	"Settings"
public static final java.lang.String	MD_PROPERTY_TYPE	"Type"
public static final java.lang.String	MD_PROPERTY_UPDATE	"UpdateOnInsert"

chemaxon.jchem.db.RegenerationChecker

Modifier and Type	Constant Field	Value
public static final java.lang.String	ATTR_OPERATION	"operation"
public static final java.lang.String	GET_TABLE_COLUMN_DATA_SQL	"SELECT * FROM [TABLENAME] WHERE 1=2"
public static final java.lang.String	OPER_EQUALS	"eq"
public static final java.lang.String	OPER_NOT_EQUALS	"noteq"
public static final java.lang.String	TAG_CONDITION	"condition"
public static final java.lang.String	TAG_CT	"ct"
public static final java.lang.String	TAG_FULL	"full"
public static final java.lang.String	TAG_MD	"md"
public static final java.lang.String	TAG_NOCT	"noct"
public static final java.lang.String	TAG_PROPERTY	"property"
public static final java.lang.String	TAG_PROPERTY_NAME	"name"
public static final java.lang.String	TAG_PROPERTY_VALUE	"value"

chemaxon.jchem.db.RegenerationConstants

Modifier and Type	Constant Field	Value
public static final int	REGENERATION_MODE_NORMAL	0
public static final int	REGENERATION_MODE_NOT_PRECALCULATED	2
public static final int	REGENERATION_MODE_PRECALCULATION	1
public static final int	REGENERATION_TYPE_ANY	4
public static final int	REGENERATION_TYPE_CT	1
public static final int	REGENERATION_TYPE_FULL	0
public static final int	REGENERATION_TYPE_MD	3
public static final int	REGENERATION_TYPE_NONE	-1
public static final int	REGENERATION_TYPE_WITHOUT_CT	2
public static final int	TABLE_VERSION_NEWER	2
public static final int	TABLE_VERSION_OK	0
public static final int	TABLE_VERSION_OLDER	1

chemaxon.jchem.db.TableTypeConstants

Modifier and Type	Constant Field	Value
public static final int	MYSQL_DEFAULT_TABLE_TYPE	0
public static final int	MYSQL_FORCE_INNO_DB	1
public static final int	MYSQL_FORCE_MYISAM	2
public static final int	TABLE_TYPE_ANY_STRUCTURES	2
public static final int	TABLE_TYPE_DEFAULT	0
public static final java.lang.String	TABLE_TYPE_IS_NOT_SUPPORTED	"This table type is not allowed for MS Access"
public static final int	TABLE_TYPE_MARKUSH_LIBRARIES	3
public static final int	TABLE_TYPE_MOLECULES	0
public static final int	TABLE_TYPE_QUERY_STRUCTURES	4
public static final int	TABLE_TYPE_REACTIONS	1

chemaxon.jchem.db.UpdateHandler

Modifier and Type	Constant Field	Value
public static final int	DUPLICATE_FILTERING_OFF	2
public static final int	DUPLICATE_FILTERING_ON	1
public static final int	DUPLICATE_FILTERING_TABLE_OPTION	0
public static final int	INSERT	1
public static final int	INSERT_WITH_ID	2
public static final int	QUERY_TABLE_ENUMERATION_LIMIT	500
public static final int	UPDATE	0

chemaxon.jchem.file.ProgressWriter

Modifier and Type	Constant Field	Value
public static final int	ERROR	0
public static final int	INFO	2
public static final int	WARNING	1

chemaxon.jep.*

chemaxon.jep.ChemJEP

Modifier and Type	Constant Field	Value
public static final int	FALSE	0
public static final int	TRUE	1
public static final int	UNDECIDED	2

chemaxon.jep.Evaluator

Modifier and Type	Constant Field	Value
public static final java.lang.String	CONFIG_DIR	"config"
public static final java.lang.String	DEFAULT_TAG_NAME	"CALC"
public static final java.lang.String	EVALUATOR_DEFAULTS_FILE	"evaluator.xml"
public static final java.lang.String	EVALUATOR_NAMED_MOLS_FILE	"mols.smarts"
public static final java.lang.String	EVALUATOR_SCRIPT_FILE	"jep.script"

chemaxon.jep.context.ReactionContext

Modifier and Type	Constant Field	Value
public static final java.lang.String	AATOM	"aatom"
public static final java.lang.String	AGENT	"agent"
public static final java.lang.String	PATOM	"patom"
public static final java.lang.String	PRODUCT	"product"
public static final java.lang.String	RATOM	"ratom"
public static final java.lang.String	REACTANT	"reactant"

chemaxon.license.*

chemaxon.license.LicenseManager

Modifier and Type	Constant Field	Value
public static final java.lang.String	ALIGNMENT	"3D Alignment"
public static final java.lang.String	CALCULATIONS_PACK	"Calculations Pack"
public static final java.lang.String	CARTRIDGE	"JChem Cartridge"
public static final java.lang.String	CHARGE_PLUGIN_GROUP	"Charge Plugin Group"
public static final java.lang.String	CHEM_CURATOR_COMPOUND	"ChemCurator Compound"
public static final java.lang.String	CHEM_CURATOR_FULL	"ChemCurator Full"
public static final java.lang.String	CHEMLOCATOR_PERSONAL	"ChemLocator Personal"
public static final java.lang.String	CHEMLOCATOR_SERVER	"ChemLocator Server"
public static final java.lang.String	CHINESE_NAME_TO_STRUCTURE	"Chinese Name to Structure"
public static final java.lang.String	CONFORMATION_PLUGIN_GROUP	"Conformation Plugin Group"
public static final java.lang.String	DOCUMENT_ANNOTATOR	"Document Annotator"
public static final java.lang.String	DOCUMENT_TO_STRUCTURE	"Document to Structure"
public static final java.lang.String	ECFP_FCFP	"ECFP/FCFP"
public static final java.lang.String	FRAGMENTER	"Fragmenter"
public static final java.lang.String	GEOMETRY_PLUGIN_GROUP	"Geometry Plugin Group"
public static final java.lang.String	HBDA_PLUGIN	"HBDA Plugin"
public static final java.lang.String	HUCKEL_ANALYSIS_PLUGIN	"Huckel Analysis Plugin"
public static final java.lang.String	INSTANT_JCHEM	"Instant JChem"
public static final java.lang.String	INSTANT_JCHEM_PIVOTING	"Instant JChem Pivoting"
public static final java.lang.String	INSTANT_JCHEM_SERVER	"Instant JChem Server"
public static final java.lang.String	INSTANT_JCHEM_VIZ	"Instant JChem VIZ"
public static final java.lang.String	ISOMERS_PLUGIN_GROUP	"Isomers Plugin Group"
public static final java.lang.String	JAPANESE_NAME_TO_STRUCTURE	"Japanese Name to Structure"
public static final java.lang.String	JCHEM	"JChem Base"
public static final java.lang.String	JCHEM_FOR_EXCEL	"JChem for Excel"
public static final java.lang.String	JCHEM_FOR_OFFICE	"JChem for Office"
public static final java.lang.String	JCHEM_FOR_SHAREPOINT	"JChem for SharePoint"
public static final java.lang.String	JCHEM_FOR_SHAREPOINT_SEARCH	"JChem for SharePoint Search"
public static final java.lang.String	JKLUSTOR	"JKlustor"
public static final java.lang.String	MARKUSH_EDITOR	"Markush Editor"
public static final java.lang.String	MARKUSH_ENUM_PLUGIN	"Markush Enumeration Plugin"
public static final java.lang.String	MARKUSH_SEARCH	"Markush Search"
public static final java.lang.String	MARVIN_APPLETS	"Marvin Applets"
public static final java.lang.String	MARVIN_BEANS	"Marvin Beans"
public static final java.lang.String	MCES	"MCES"
public static final java.lang.String	METABOLIZER	"Metabolizer"
public static final java.lang.String	MOLECULAR_DESCRIPTORS	"Molecular Descriptors"
public static final java.lang.String	NAME_TO_STRUCTURE	"Name to Structure"
public static final java.lang.String	NMR	"NMR Predictor"
public static final java.lang.String	PARTITIONING_PLUGIN_GROUP	"Partitioning Plugin Group"
public static final java.lang.String	PLEXUS	"Plexus"
public static final java.lang.String	PLEXUS_CONNECT	"Plexus Connect"
public static final java.lang.String	POSTGRES_CARTRIDGE	"Postgres Cartridge"
public static final java.lang.String	PREDICTOR_PLUGIN	"Predictor Plugin"
public static final java.lang.String	PROTONATION_PLUGIN_GROUP	"Protonation Plugin Group"
public static final java.lang.String	REACTOR	"Reactor"
public static final java.lang.String	REFRACTIVITY_PLUGIN	"Refractivity Plugin"
public static final java.lang.String	REGISTRATION_SYSTEM	"Registration System"
public static final java.lang.String	SCREEN	"Screen"
public static final java.lang.String	SCREEN3D	"3D Screen"
public static final java.lang.String	STANDARDIZER	"Standardizer"
public static final java.lang.String	STRUCTURAL_FRAMEWORKS_PLUGIN	"Structural Frameworks Plugin"
public static final java.lang.String	STRUCTURE_CHECKER	"Structure Checker"
public static final java.lang.String	STRUCTURE_TO_NAME	"Structure to Name"
public static final java.lang.String	WEB_SERVICES_SERVER	"Web Services Server"

chemaxon.marvin.*

chemaxon.marvin.alignment.MinMaxDistance

Modifier and Type	Constant Field	Value
public static final double	WEIGHT	1.0

chemaxon.marvin.alignment.Pharmacophore3D

Modifier and Type	Constant Field	Value
public static final int	ACCP	4
public static final int	ALIPHATIC_RINGCENTER	1024
public static final int	ANCHOR	2048
public static final int	AROMATIC_ATOM	8
public static final int	AROMATIC_RINGCENTER	512
public static final int	DONR	1
public static final int	H	256
public static final int	HYDR	16
public static final int	LP	128
public static final int	NEG	64
public static final int	POS	32

chemaxon.marvin.beans.MSketchPane

Modifier and Type	Constant Field	Value
public static final int	SM_ATOM	2
public static final int	SM_BOND	3
public static final int	SM_DELETE	1
public static final int	SM_FLAGS_OFF	8
public static final int	SM_MASK	255
public static final int	SM_SELECT	0
public static final int	SM_SELECT_LASSO	4

chemaxon.marvin.beans.MViewPane

Modifier and Type	Constant Field	Value
public static final int	EDITABLE	1
public static final int	SKETCHABLE	2
public static final int	VIEW_ONLY	0

chemaxon.marvin.calculations.AlignmentPlugin

Modifier and Type	Constant Field	Value
public static final int	STEP_DEFAULT	2000

chemaxon.marvin.calculations.ConformerPlugin

Modifier and Type	Constant Field	Value
public static final int	OPTIMIZATION_NORMAL	1
public static final int	OPTIMIZATION_STRICT	2
public static final int	OPTIMIZATION_VERY_LOOSE	0
public static final int	OPTIMIZATION_VERY_STRICT	3

chemaxon.marvin.calculations.HBDAPlugin

Modifier and Type	Constant Field	Value
public static final java.lang.String	ACCEPTOR_SIGN	"A"
public static final java.lang.String	DONOR_SIGN	"D"
public static final double	EPSILON	0.1

chemaxon.marvin.calculations.IsoelectricPointPlugin

Modifier and Type	Constant Field	Value
public static final java.lang.String	TYPE_DISTR	"chargedistr"

chemaxon.marvin.calculations.logDPlugin

Modifier and Type	Constant Field	Value
public static final int	METHOD_KLOP	2
public static final int	METHOD_PHYS	3
public static final int	METHOD_USER_DEFINED	4
public static final int	METHOD_VG	1
public static final int	METHOD_WEIGHTED	5

chemaxon.marvin.calculations.logPPlugin

Modifier and Type	Constant Field	Value
public static final int	METHOD_KLOP	2
public static final int	METHOD_PHYS	3
public static final int	METHOD_USER_DEFINED	4
public static final int	METHOD_VG	1
public static final int	METHOD_WEIGHTED	5

chemaxon.marvin.calculations.MarkushEnumerationPlugin

Modifier and Type	Constant Field	Value
public static final int	COLORING_ALL	3
public static final int	COLORING_NONE	0
public static final int	COLORING_RGROUPS	2
public static final int	COLORING_SCAFFOLD	1

chemaxon.marvin.calculations.MSAPlugin

Modifier and Type	Constant Field	Value
public static final int	SOLVENT	1
public static final int	VAN_DER_WAALS	0

chemaxon.marvin.calculations.pKaPlugin

Modifier and Type	Constant Field	Value
public static final int	ACIDIC	-1
public static final int	BASIC	1
public static final int	DEF_MAXIONS	8
public static final double	DEF_TEMPERATURE	298.0
public static final int	DYNAMICpKaPREFIX	2
public static final int	MODEL_LARGE	1
public static final int	MODEL_SMALL	0
public static final int	STATICpKaPREFIX	1
public static final java.lang.String	TYPE_DISTR	"msdistr"

chemaxon.marvin.calculations.StereoisomerPlugin

Modifier and Type	Constant Field	Value
public static final int	BOTH	3
public static final int	DOUBLE_BOND	2
public static final int	TETRAHEDRAL	1

chemaxon.marvin.common.ParameterConstants

Modifier and Type	Constant Field	Value
public static final java.lang.String	ADD_REMOVE_H_ATOMS_ENABLED	"addRemoveHatomsEnabled"
public static final java.lang.String	AMINOACID_BOND_COLORING_ENABLED	"aminoAcidBondColoringEnabled"
public static final java.lang.String	ANY_BOND	"anybond"
public static final java.lang.String	ATOM_FONT	"atomFont"
public static final java.lang.String	ATOM_FONT_SIZE	"atomFontSize"
public static final java.lang.String	ATOM_MAPPING_VISIBLE	"atomMappingVisible"
public static final java.lang.String	ATOM_NUMBERING_TYPE	"atomNumberingType"
public static final java.lang.String	ATOM_NUMBERS_VISIBLE	"atomNumbersVisible"
public static final java.lang.String	ATOM_PROPERTIES_VISIBLE	"atomPropertiesVisible"
public static final java.lang.String	ATOM_SET_COLOR	"atomSetColor"
public static final java.lang.String	ATOM_SIZE	"atomsize"
public static final java.lang.String	ATOM_SYMBOL_VISIBLE_3D	"atomSymbolVisible3D"
public static final java.lang.String	ATOM_SYMBOLS_VISIBLE	"atomSymbolsVisible"
public static final java.lang.String	AUTOMATIC_FOG_ENABLED	"automaticFogEnabled"
public static final java.lang.String	AUTOMATIC_REACTION_ENABLED	"automaticReactionEnabled"
public static final java.lang.String	BALL_RADIUS	"ballRadius"
public static final java.lang.String	BOLD_BOND_WIDTH	"boldBondWidth"
public static final java.lang.String	BOND_HASH_SPACING	"bondHashSpacing"
public static final java.lang.String	BOND_LENGTH	"bondLength"
public static final java.lang.String	BOND_LENGTH_VISIBLE	"bondLengthVisible"
public static final java.lang.String	BOND_SET_COLOR	"bondSetColor"
public static final java.lang.String	BOND_SPACING	"bondSpacing"
public static final java.lang.String	CACHE_MOLECULES	"cacheMols"
public static final java.lang.String	CHARGE_WITH_CIRCLE	"chargeWithCircle"
public static final java.lang.String	CHIRALITY_SUPPORT	"chiralitySupport"
public static final java.lang.String	CLEANING_2D_OPTIONS	"clean2dOpts"
public static final java.lang.String	CLEANING_3D_OPTIONS	"clean3dOpts"
public static final java.lang.String	CLEANING_DIMENSION	"cleanDim"
public static final java.lang.String	CLEANING_OPTIONS	"cleanOpts"
public static final java.lang.String	COLOR_SCHEME	"colorScheme"
public static final java.lang.String	COORDINATE_BOND_STYLE	"coordinateBondStyle"
public static final java.lang.String	COORDINATE_BOND_STYLE_AT_MULTICENTER	"coordinateBondStyleAtMulticenter"
public static final java.lang.String	COPY_AS_FORMAT	"copyAsFormat"
public static final java.lang.String	COPY_OPTIONS	"copyOpts"
public static final java.lang.String	DEBUG	"debug"
public static final java.lang.String	DEFAULT_SAVE_FORMAT	"defaultSaveFormat"
public static final java.lang.String	DISPLAY_QUALITY	"dispQuality"
public static final java.lang.String	DOWN_WEDGE	"downWedge"
public static final java.lang.String	ESCAPE_CHAR	"escapeChar"
public static final java.lang.String	EXPLICIT_H	"explicitH"
public static final java.lang.String	EZ_VISIBLE	"EZVisible"
public static final java.lang.String	FOG_FACTOR	"fogFactor"
public static final java.lang.String	IMAGE_IMPORT_SERVICE_URL	"imageImportServiceURL"
public static final java.lang.String	IMPLICIT_H	"implicitH"
public static final java.lang.String	IMPORT_CONVERSION	"importConv"
public static final java.lang.String	INVISIBLE_SETS	"invisibleSets"
public static final java.lang.String	LICENSE	"license"
public static final java.lang.String	LICENSE_FILE	"licenseFile"
public static final java.lang.String	LIGAND_ERROR_VISIBLE	"ligandErrorVisible"
public static final java.lang.String	LISTEN_PROPERTY_CHANGE	"listenpropertychange"
public static final java.lang.String	LOAD_MOLECULES	"loadMols"
public static final java.lang.String	LONE_PAIRS_AS_LINE	"lonePairsAsLine"
public static final java.lang.String	LONE_PAIRS_VISIBLE	"lonePairsVisible"
public static final java.lang.String	MARGIN_SIZE	"marginSize"
public static final java.lang.String	MOLECULE	"mol"
public static final java.lang.String	MOLECULE_BACKGROUND	"molbg"
public static final java.lang.String	MOLECULE_FORMAT	"molFormat"
public static final java.lang.String	MP_VISIBLE	"mpVisible"
public static final java.lang.String	NAME_IO_WEB_SERVICE	"namingWebServiceURL"
public static final java.lang.String	PEPTIDE_DISPLAY_TYPE	"peptideDisplayType"
public static final java.lang.String	R_GROUPS_VISIBLE	"rgroupsVisible"
public static final java.lang.String	RENDERING	"rendering"
public static final java.lang.String	SAVE_PROPERTIES	"saveproperties"
public static final java.lang.String	SET_COLORING_ENABLED	"setColoringEnabled"
public static final java.lang.String	SHOW_SETS	"showSets"
public static final java.lang.String	SKETCH_ANY_BOND	"sketchAnyBond"
public static final java.lang.String	SKETCH_HELP	"sketchHelp"
public static final java.lang.String	SKIN	"skin"
public static final java.lang.String	SPLASH_SCREEN_IMAGE	"splashScreenImage"
public static final java.lang.String	STICK_THICKNESS	"stickThickness"
public static final java.lang.String	TRANSFER_BUTTON_ICON	"transferButtonIcon"
public static final java.lang.String	TRANSFER_BUTTON_TEXT	"transferButtonText"
public static final java.lang.String	TRANSFER_BUTTON_VISIBLE	"transferButtonVisible"
public static final java.lang.String	USE_WARNINGS	"useWarnings"
public static final java.lang.String	VALENCE_PROPERTY_VISIBLE	"valencePropertyVisible"
public static final java.lang.String	VIEW_ANY_BOND	"viewAnyBond"
public static final java.lang.String	VIEW_EXPLICIT_H	"viewExplicitH"
public static final java.lang.String	VIEW_HELP	"viewHelp"
public static final java.lang.String	VIEW_NAVIGATION_MODE_2D	"viewNavMode2d"
public static final java.lang.String	VIEW_NAVIGATION_MODE_3D	"viewNavMode3d"
public static final java.lang.String	WIRE_THICKNESS	"wireThickness"
public static final java.lang.String	ZERO_BASED_ATOM_INDEXING	"zeroBasedAtomIndexing"

chemaxon.marvin.common.UserSettings

Modifier and Type	Constant Field	Value
public static final java.lang.String	MARVIN_CONFIG_DEFAULT_PATH	"marvin.properties"
public static final int	MAX_RECENT_FILE_LIST_SIZE	50
public static final int	MIN_RECENT_FILE_LIST_SIZE	1
public static final java.lang.String	PROPERTY_TYPE_ALL	"all"
public static final java.lang.String	PROPERTY_TYPE_DEFAULT	"default"
public static final java.lang.String	PROPERTY_TYPE_PERSISTENT	"persistent"
public static final java.lang.String	PROPERTY_TYPE_TRANSIENT	"transient"

chemaxon.marvin.io.MRecord

Modifier and Type	Constant Field	Value
public static final int	F_MOL_MISSING	1

chemaxon.marvin.io.image.ImageExportParamConstants

Modifier and Type	Constant Field	Value
public static final java.lang.String	ABSOLUTE_LABEL_VISIBLE	"absLabelVisible"
public static final java.lang.String	ATOM_FONT	"atomFont"
public static final java.lang.String	ATOM_MAPPING_VISIBLE	"amap"
public static final java.lang.String	ATOM_NUMBERING_TYPE	"atomNumberingType"
public static final java.lang.String	ATOM_NUMBERS_VISIBLE	"anum"
public static final java.lang.String	ATOM_PROPERTIES_VISIBLE	"aprop"
public static final java.lang.String	ATOMSIZE	"atsiz"
public static final java.lang.String	BALLRADIUS	"ballRadius"
public static final java.lang.String	BOLD_BOND_WIDTH	"boldbondw"
public static final java.lang.String	BOND_HASH_SPACING	"bondHashSpacing"
public static final java.lang.String	BOND_LENGTH	"bondl"
public static final java.lang.String	BOND_LENGTH_VISIBLE	"bondLengthVisible"
public static final java.lang.String	BONDWIDTH	"bondw"
public static final java.lang.String	CHARGE_FONT	"chargeFont"
public static final java.lang.String	CHARGE_FONT_SIZE	"chargeFontSize"
public static final java.lang.String	CHARGE_WITH_CIRCLE	"chargeWithCircle"
public static final java.lang.String	DISABLE_AMINOACID_BOND_COLORING	"disableAminoAcidBondColoring"
public static final java.lang.String	EZ_LABEL_VISIBLE	"ez"
public static final java.lang.String	FOG_FACTOR	"fogFactor"
public static final java.lang.String	GRAPH_INVARIANTS_VISIBLE	"grinvVisible"
public static final java.lang.String	HEIGHT	"h"
public static final java.lang.String	HIDE_ATOM_SYMBOL_IN_3D	"noatsym"
public static final java.lang.String	INVISIBLE_R_GROUPS	"noRGroups"
public static final java.lang.String	INVISIBLE_R_LOGIC	"noRLogic"
public static final java.lang.String	LIGAND_ERROR_VISIBLE	"liganderr"
public static final java.lang.String	LONE_PAIRS_AS_LINE	"lonePairsAsLine"
public static final java.lang.String	LONE_PAIRS_VISIBLE	"lp"
public static final java.lang.String	MARGINSIZE	"marginSize"
public static final java.lang.String	MAXSCALE	"maxscale"
public static final java.lang.String	MP_LABEL_VISIBLE	"mp"
public static final java.lang.String	NOANTIALIAS	"noantialias"
public static final java.lang.String	ONE_LETTER_PEPTIDE_DISPLAY	"oneLetterPeptideDisplay"
public static final java.lang.String	SCALE	"scale"
public static final java.lang.String	SETCOLORS	"setcolors"
public static final java.lang.String	SHOW_EXPLICIT_LONE_PAIRS	"lpexpl"
public static final java.lang.String	STICKTHICKNESS	"stickThickness"
public static final java.lang.String	TRANSPARENT_BACKGROUND	"transbg"
public static final java.lang.String	VALANCE_ERROR_VISIBLE	"valenceErrorVisible"
public static final java.lang.String	VALENCE_PROPERTY_VISIBLE	"valprop"
public static final java.lang.String	WIDTH	"w"
public static final java.lang.String	WIRETHICKNESS	"wireThickness"

chemaxon.marvin.modules.datatransfer.MTransferable

Modifier and Type	Constant Field	Value
public static final int	CLIPBOARD_OPERATION_GET	2
public static final int	CLIPBOARD_OPERATION_PUT	1
public static final int	CLIPBOARD_OPERATION_UNDEFINED	0
public static final java.lang.String	CLIPBOARD_ORIGIN_IS_FILE	"ClipboardOriginIsFile"

chemaxon.marvin.paint.DispOptConsts

Modifier and Type	Constant Field	Value
public static final int	ABS_FLAG	33554432
public static final int	APPLY_DEPTH_CUE	32
public static final int	ATMAP_FLAG	4096
public static final int	ATNUM_FLAG	2048
public static final int	ATPROP_FLAG	8
public static final int	ATSYM_FLAG	1024
public static final int	AUTOMATIC_FOG	32
public static final int	BONDLEN_FLAG	8192
public static final int	CARBON_VIS_INCHAIN	268435456
public static final java.lang.String	CARBON_VIS_INCHAIN_S	"inChain"
public static final int	CARBON_VIS_MASK	805306368
public static final int	CARBON_VIS_OFF	0
public static final java.lang.String	CARBON_VIS_OFF_S	"off"
public static final int	CARBON_VIS_OFFSET	28
public static final int	CARBON_VIS_ON	536870912
public static final java.lang.String	CARBON_VIS_ON_S	"on"
public static final int	CHARGE_WITH_CIRCLE_FLAG	4096
public static final int	CHARGE_WITH_CIRCLE_OFFSET	12
public static final int	COLORS_MASK	192
public static final int	COLORS_OFFSET	6
public static final java.lang.String	COORDINATE_BOND_ARROW_S	"arrow"
public static final int	COORDINATE_BOND_AT_MULTICENTER_FLAG	256
public static final int	COORDINATE_BOND_AT_MULTICENTER_OFFSET	8
public static final java.lang.String	COORDINATE_BOND_HASHED_S	"hashed"
public static final java.lang.String	COORDINATE_BOND_SOLID_S	"solid"
public static final int	COORDINATE_BOND_STYLE_FLAG	512
public static final int	COORDINATE_BOND_STYLE_OFFSET	9
public static final int	CPK_SCHEME	64
public static final java.lang.String	CPK_SCHEME_S	"cpk"
public static final int	DAYLIGHT_DOWNWEDGE_FLAG	1048576
public static final java.lang.String	DAYLIGHT_DOWNWEDGE_S	"daylight"
public static final int	DIM_FLAG	1073741824
public static final int	DOWNWEDGE_OFFSET	20
public static final int	EZ_FLAG	65536
public static final int	GRINV_FLAG	512
public static final int	GROUP_SCHEME	192
public static final java.lang.String	GROUP_SCHEME_S	"group"
public static final int	IMPLICITH_ALL	3
public static final java.lang.String	IMPLICITH_ALL_S	"all"
public static final int	IMPLICITH_HETERO	1
public static final java.lang.String	IMPLICITH_HETERO_S	"hetero"
public static final int	IMPLICITH_HETEROTERM	2
public static final java.lang.String	IMPLICITH_HETEROTERM_S	"heteroterm"
public static final int	IMPLICITH_MASK	3
public static final int	IMPLICITH_OFF	0
public static final java.lang.String	IMPLICITH_OFF_S	"off"
public static final int	LIGAND_ERROR_VISIBILITY_FLAG	128
public static final int	LIGAND_ORDER_MASK	3
public static final int	LIGAND_ORDER_OFF	1
public static final java.lang.String	LIGAND_ORDER_OFF_S	"off"
public static final int	LIGAND_ORDER_ON	0
public static final java.lang.String	LIGAND_ORDER_ON_S	"on"
public static final int	LIGAND_ORDER_ONLY_WITH_DEFINITION	2
public static final java.lang.String	LIGAND_ORDER_ONLY_WITH_DEFINITION_S	"showOnlyWithDefinition"
public static final int	LONE_PAIRS_AS_LINE_FLAG	2048
public static final int	LONE_PAIRS_AS_LINE_OFFSET	11
public static final int	LP_AUTO_FLAG	134217728
public static final int	LP_FLAG	16777216
public static final java.lang.String	MDL_DOWNWEDGE_S	"mdl"
public static final int	MM_MASK	56
public static final int	MM_OFFSET	3
public static final int	MM_ROT3D	24
public static final int	MM_ROTZ	16
public static final int	MM_ZOOM	8
public static final int	MM_ZOOMROT	32
public static final int	MONO_SCHEME	0
public static final java.lang.String	MONO_SCHEME_S	"mono"
public static final java.lang.String	ONE_LETTER_PEPTIDE_DISPLAY_S	"1-letter"
public static final int	PEPTIDE_DISPLAY_SETTINGS_FLAG	1024
public static final int	PEPTIDE_DISPLAY_SETTINGS_OFFSET	10
public static final int	QUALITY_MASK	8388608
public static final int	QUALITY_OFFSET	23
public static final int	RGROUPS_FLAG	67108864
public static final int	RLOGIC_FLAG	16
public static final int	RS_ALL	32768
public static final int	RS_ALL_POSSIBLE	49152
public static final java.lang.String	RS_ALL_POSSIBLE_S	"allPossible"
public static final java.lang.String	RS_ALL_S	"all"
public static final int	RS_MASK	49152
public static final int	RS_OFF	0
public static final java.lang.String	RS_OFF_S	"off"
public static final int	RS_OFFSET	14
public static final int	RS_SELECTED	16384
public static final java.lang.String	RS_SELECTED_S	"selected"
public static final int	SET_SCHEME_FLAG	256
public static final int	SHAPELY_SCHEME	128
public static final java.lang.String	SHAPELY_SCHEME_S	"shapely"
public static final java.lang.String	THREE_LETTER_PEPTIDE_DISPLAY_S	"3-letter"
public static final int	VALENCE_PROP_VISIBILITY_FLAG	64

chemaxon.marvin.plugin.CalculatorPlugin

Modifier and Type	Constant Field	Value
public static final int	ATOM	1
public static final int	BLUE	255
protected static final int	CALCRGB_OFF	32
protected static final java.lang.String	COVALENT_HYDRATION_ERROR_REMARK	"Covalent hydration occurred."
protected static final java.lang.String	CRITICAL_ERROR_MSG	"Inconsistent molecular structure."
public static final double	EPSILON	0.1
protected static final java.lang.String	INCORRECT_AROMATIC_NITROGEN_REMARK	"Aromatic nitrogen is not specified correctly."
protected static final java.lang.String	INSTABLE_TAUTOMERIC_FORM_REMARK	"Instable tautomeric form."
protected static final java.lang.String	KEEP_HYDROGENS	"keephydrogens"
public static final int	MOLECULE	2
public static final int	MOLECULES	4
public static final java.lang.String	PLUGIN_CLASS_KEY	"Plugin-Class"
public static final java.lang.String	PLUGIN_DIR	"/xjars"
public static final int	RED	16711680
protected static final java.lang.String	TRUE	"true"

chemaxon.marvin.plugin.CalculatorPluginDisplay

Modifier and Type	Constant Field	Value
protected static final int	CELLSIZE	380
protected static final int	HTML	3
protected static final int	LABEL	1
protected static final int	MAX_LINE_LENGTH	50
protected static final int	NONE	0
protected static final int	TEXT	2
protected static final java.lang.String	WORD_SEPARATORS	"- "

chemaxon.marvin.plugin.PluginFactory

Modifier and Type	Constant Field	Value
public static final java.lang.String	DEFAULT_CONFIG_FILE	"plugins.properties"
public static final java.lang.String	NOPARAMS	"NOPARAMS"
public static final java.lang.String	PRELOAD	"PRELOAD"
public static final java.lang.String	SEPARATOR	"SEPARATOR"

chemaxon.marvin.services.ServiceDescriptorEditor<T extends chemaxon.marvin.services.ServiceDescriptor>

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_PREFERRED_DESCRIPTION	"PreferredDescription"
public static final java.lang.String	PROPERTY_KEY_PREFERRED_NAME	"PreferredName"
public static final java.lang.String	PROPERTY_KEY_USERSETTINGS	"UserSettings"
public static final java.lang.String	PROPERTY_KEY_VALID	"EditorValid"

chemaxon.marvin.services.ServiceDescriptorTools

Modifier and Type	Constant Field	Value
public static final java.lang.String	DEFAULT_SERVICE_CONFIGURATION_PATH	"/chemaxon/marvin/services/config/resources/default.xml"
public static final java.lang.String	DEFAULT_SERVICE_DESCRIPTOR_EDITOR_PROVIDER_CLASSNAME	"chemaxon.marvin.services.ui.XMLBasedServiceDescriptorEditorProvider"
public static final java.lang.String	DEFAULT_SERVICE_DESCRIPTOR_READER_CLASSNAME	"chemaxon.marvin.services.config.XMLBasedServiceDescriptorReader"
public static final java.lang.String	DEFAULT_SERVICE_DESCRIPTOR_WRITER_CLASSNAME	"chemaxon.marvin.services.config.XMLBasedServiceDescriptorWriter"
public static final java.lang.String	DEFAULT_SERVICE_DIALOG_PROVIDER_CLASSNAME	"chemaxon.marvin.sketch.swing.modules.services.SketchBasedServiceDialogProvider"
public static final java.lang.String	DEFAULT_USER_SERVICE_CONFIGURATION_FILENAME	"servicesconfig.xml"
public static final java.lang.String	SERVICE_CONFIGURATION_PATH_PROPERTY_KEY	"chemaxon.marvin.services.ServiceConfigurationPath"
public static final java.lang.String	SERVICE_DIALOG_PROVIDER_CLASS_NAME_PROPERTY_KEY	"chemaxon.marvin.services.ServiceDialogProvider"

chemaxon.marvin.services.json.JsonServiceDescriptor

Modifier and Type	Constant Field	Value
public static final java.lang.String	DESCRIPTOR_URI	"descriptorUri"

chemaxon.marvin.services.localservice.LocalServiceDescriptor

Modifier and Type	Constant Field	Value
public static final java.lang.String	CLASS	"class"

chemaxon.marvin.services.soap.SoapServiceDescriptor

Modifier and Type	Constant Field	Value
public static final java.lang.String	NAMESPACE	"namespace"
public static final java.lang.String	PORT	"port"
public static final java.lang.String	SERVICE	"webservice"
public static final java.lang.String	WSDL	"wsdl"

chemaxon.marvin.sketch.SketchParameterConstants

Modifier and Type	Constant Field	Value
public static final java.lang.String	ABBREVIATED_GROUPS	"abbrevgroups"
public static final java.lang.String	ABBREVIATED_GROUPS_ALLOWED	"abbrevgroupsAllowed"
public static final java.lang.String	ABSOLUTE_LABEL_VISIBLE	"absLabelVisible"
public static final java.lang.String	ATOM_STRINGS	"atomStrings"
public static final java.lang.String	AUTO_CHECK_STRUCTURE	"autoCheckStructure"
public static final java.lang.String	AUTO_SCALE	"autoscale"
public static final java.lang.String	BACKGROUNDLOAD_ENABLED	"bgloadEnabled"
public static final java.lang.String	BACKGROUNDLOAD_PRIORITY	"bgloadPriority"
public static final java.lang.String	BOND_DRAGGED_ALONG	"bondDraggedAlong"
public static final java.lang.String	BUTTON_MENUBAR	"buttonmenubar"
public static final java.lang.String	CUSTOMIZATION_ENABLED	"customizationEnabled"
public static final java.lang.String	DATA_COLLECTION_CONSENT	"dataCollectionConsent"
public static final java.lang.String	DATA_COLLECTION_SERVER	"dataCollectionServer"
public static final java.lang.String	DEFAULT_TOOL	"defaultTool"
public static final java.lang.String	DETACH	"detach"
public static final java.lang.String	DISABLE_SPECIAL_NODES	"disableSpecialNodes"
public static final java.lang.String	ELEMENTS	"elements"
public static final java.lang.String	ENABLED_2D_VIEWER	"2dviewerEnabled"
public static final java.lang.String	ENABLED_3D_VIEWER	"3dviewerEnabled"
public static final java.lang.String	EXTRA_BONDS	"extraBonds"
public static final java.lang.String	EXTRA_TEMPLATES	"xtmpls"
public static final java.lang.String	GRAPH_INVARIANTS_VISIBLE	"grinvVisible"
public static final java.lang.String	GRID_VISIBLE	"sketchGridVisible"
public static final java.lang.String	GROUPTYPE_ALTERNATING_COPOLYMER_GROUP	"alternatingCopolymerGroup"
public static final java.lang.String	GROUPTYPE_ANYPOLYMER_GROUP	"anypolymerGroup"
public static final java.lang.String	GROUPTYPE_BLOCK_COPOLYMER_GROUP	"blockCopolymerGroup"
public static final java.lang.String	GROUPTYPE_COMPONENT_GROUP	"componentGroup"
public static final java.lang.String	GROUPTYPE_COPOLYMER_GROUP	"copolymerGroup"
public static final java.lang.String	GROUPTYPE_CROSSLINK_GROUP	"crosslinkGroup"
public static final java.lang.String	GROUPTYPE_GENERIC_GROUP	"genericGroup"
public static final java.lang.String	GROUPTYPE_GRAFT_GROUP	"graftGroup"
public static final java.lang.String	GROUPTYPE_MER_GROUP	"merGroup"
public static final java.lang.String	GROUPTYPE_MODIFICATION_GROUP	"modificationGroup"
public static final java.lang.String	GROUPTYPE_MONOMER_GROUP	"monomerGroup"
public static final java.lang.String	GROUPTYPE_MULTIPLE_GROUP	"multipleGroup"
public static final java.lang.String	GROUPTYPE_ORDERED_MIXTURE_GROUP	"orderedMixtureGroup"
public static final java.lang.String	GROUPTYPE_RANDOM_COPOLYMER_GROUP	"randomCopolymerGroup"
public static final java.lang.String	GROUPTYPE_RANGE_GROUP	"rangeGroup"
public static final java.lang.String	GROUPTYPE_SRU_GROUP	"sruGroup"
public static final java.lang.String	GROUPTYPE_SUPERATOM_GROUP	"superatomGroup"
public static final java.lang.String	GROUPTYPE_UNORDERED_MIXTURE_GROUP	"unorderedMixtureGroup"
public static final java.lang.String	IMAGE_SAVE_FORMAT	"imageSaveFormat"
public static final java.lang.String	IMAGE_SAVE_URL	"imageSaveURL"
public static final java.lang.String	IMAGE_SHOW_URL	"imageShowURL"
public static final java.lang.String	LAST_LICENSE	"lastLicense"
public static final java.lang.String	LONE_PAIRS_AUTO_CALCULATION	"lonePairsAutoCalc"
public static final java.lang.String	MAX_SCALE	"maxscale"
public static final java.lang.String	MENU_CUSTOMIZATION_FILE	"menuconfig"
public static final java.lang.String	MENUBAR	"menubar"
public static final java.lang.String	MERGE_DISTANCE	"mergedst"
public static final java.lang.String	MOL_LOADER_FINISHED_EVENT	"molLoaderFinishedEvent"
public static final java.lang.String	MORE_ENABLED	"moreEnabled"
public static final java.lang.String	MP_VISIBLE	"mpVisible"
public static final java.lang.String	PRELOAD	"preload"
public static final java.lang.String	QUERY_ATOMS	"queryAtoms"
public static final java.lang.String	REACTION_ERROR_VISIBLE	"reactionErrorVisible"
public static final java.lang.String	REACTION_SUPPORT	"reactionSupport"
public static final java.lang.String	RLOGIC_VISIBLE	"rLogicVisible"
public static final java.lang.String	SCALE	"scale"
public static final java.lang.String	SHORTCUTS	"shortcuts"
public static final java.lang.String	SIMPLE_VIEW	"simpView"
public static final java.lang.String	SKETCH_ARROW_HEAD_LENGTH	"sketchArrowHeadLength"
public static final java.lang.String	SKETCH_ARROW_HEAD_WIDTH	"sketchArrowHeadWidth"
public static final java.lang.String	SKETCH_ARROW_TAIL_LENGTH	"sketchArrowTailLength"
public static final java.lang.String	SKETCH_ARROW_TAIL_WIDTH	"sketchArrowTailWidth"
public static final java.lang.String	SKETCH_CARBON_VISIBILITY	"sketchCarbonVisibility"
public static final java.lang.String	SKETCH_LIGAND_ORDER_VISIBILITY	"sketchLigandOrderVisibility"
public static final java.lang.String	SKETCH_STARTUP_SHOWN	"sketchStartupShown"
public static final java.lang.String	SKETCHPANEL_LAST_HEIGHT	"sketchLastHeight"
public static final java.lang.String	SKETCHPANEL_LAST_WIDTH	"sketchLastWidth"
public static final java.lang.String	STATUS_BAR	"statusBar"
public static final java.lang.String	STICK_DISTANCE	"stickdst"
public static final java.lang.String	TEMPLATE_TOOLBAR_CUSTOMIZABLE	"templateToolbarCustomizable"
public static final java.lang.String	TEMPLATES	"tmpls"
public static final java.lang.String	TOOLBAR_FLOATABLE	"toolbarFloatable"
public static final java.lang.String	TOOLBAR_TEMPLATES	"ttmpls"
public static final java.lang.String	TRANSFORMATION_ENABLED	"transformationEnabled"
public static final java.lang.String	UI_DISABLED_GROUP_TYPES	"disabledGroupTypesOnUI"
public static final java.lang.String	UNDETACH_BY_X	"undetachByX"
public static final java.lang.String	UNDO	"undo"
public static final java.lang.String	USED_JARS	"usedJars"
public static final java.lang.String	VALENCE_CHECK_ENABLED	"valenceCheckEnabled"
public static final java.lang.String	VALENCE_ERROR_VISIBLE	"valenceErrorVisible"
public static final java.lang.String	VIEW_ONLY	"viewonly"
public static final java.lang.String	ZOOM_TO_SCAFFOLD_ON_LOAD	"zoomToScaffoldOnLoad"

chemaxon.marvin.space.GraphicCell

Modifier and Type	Constant Field	Value
protected static final int	DEFAULT_NEAR_EDGE	30
protected static final int	MAX_NUMBER_OF_COMPONENTS_PER_CELL	256
protected static final int	MODE_NORMAL	1
protected static final int	MODE_PICK	2

chemaxon.marvin.space.GraphicComponent

Modifier and Type	Constant Field	Value
protected static final int	COMPONENT_TYPE_ENTIRE	1
public static final int	RENDERING_QUALITY_HIGH	3
public static final int	RENDERING_QUALITY_LOW	1
public static final int	RENDERING_QUALITY_MEDIUM	2

chemaxon.marvin.space.GraphicScene

Modifier and Type	Constant Field	Value
public static final int	CELL_RANGE	2
public static final int	COMPONENT_RANGE	3
public static final int	MODE_MOVING	2
public static final int	MODE_STANDING	1
public static final java.lang.String	MSPACE_CONFIG_DEFAULT_PATH	"mspace.properties"
public static final int	SCENE_RANGE	1
public static final int	VERBOSE_LEVEL_BASIC	1
public static final int	VERBOSE_LEVEL_DEVEL	2
public static final int	VERBOSE_LEVEL_NONE	0

chemaxon.marvin.space.MacroMoleculeComponent

Modifier and Type	Constant Field	Value
public static final int	B_FACTOR_MODE	12
protected static final int	COMPONENT_TYPE_ATOM	2
protected static final int	COMPONENT_TYPE_BOND	3
protected static final int	COMPONENT_TYPE_MOLECULE	4
protected static final int	COMPONENT_TYPE_RESIDUE	5
public static final int	RAINBOW_MODE	11

chemaxon.marvin.space.MolecularSurfaceComponent

Modifier and Type	Constant Field	Value
protected static final boolean	AUTO_RESOLUTION_ENABLED	true
public static final float	DEFAULT_ISOVALUE	0.017999999225139618f
public static final float	DEFAULT_PROBE_RADIUS	1.399999976158142f
public static final float	DEFAULT_RESOLUTION	0.550000011920929f
public static final int	SURFACE_COLOR_GRID_MAPPING	7
public static final int	SURFACE_COLOR_PROPERTY_MAPPING	8
public static final int	SURFACE_COLOR_TYPE_ATOMTYPE	2
public static final int	SURFACE_COLOR_TYPE_B_FACTOR	9
public static final int	SURFACE_COLOR_TYPE_CHAIN	4
public static final int	SURFACE_COLOR_TYPE_CONSTANT	1
public static final int	SURFACE_COLOR_TYPE_EP	5
public static final int	SURFACE_COLOR_TYPE_RAINBOW	10
public static final int	SURFACE_COLOR_TYPE_RESIDUE	3
public static final int	SURFACE_COLOR_TYPE_SS	6
protected static final boolean	SURFACE_SIMPLIFICATION_ENABLED	false
protected static final int	SURFACE_SMOOTHNESS	2
public static final int	SURFACE_TYPE_BLOBBY	4
public static final int	SURFACE_TYPE_CONNOLLY	2
public static final int	SURFACE_TYPE_GAUSSIAN	5
public static final int	SURFACE_TYPE_SAS	3
public static final int	SURFACE_TYPE_VDW	1

chemaxon.marvin.space.MoleculeComponent

Modifier and Type	Constant Field	Value
protected static final int	BOND_DRAW_TYPE_BOND	1
protected static final int	BOND_DRAW_TYPE_STICK	2
protected static final int	BOND_DRAW_TYPE_WIRE	3
protected static final boolean	BOND_FACING	true
protected static final int	COMPONENT_TYPE_ATOM	2
protected static final int	COMPONENT_TYPE_BOND	3
protected static final int	COMPONENT_TYPE_MOLECULE	4
protected static final double	DEFAULT_BALL_RADIUS	0.4
protected static final int	DEFAULT_BOND_DISTANCE	100
protected static final double	DEFAULT_BOND_RADIUS	0.1
protected static final int	DEFAULT_BOND_WIDTH	50
protected static final int	DEFAULT_H_BALL_PRECISION	4
protected static final int	DEFAULT_H_BOND_SLICE_PRECISION	10
protected static final int	DEFAULT_H_JOINT_PRECISION	4
protected static final int	DEFAULT_H_SPACEFILL_PRECISION	5
protected static final int	DEFAULT_H_STICK_SLICE_PRECISION	22
protected static final int	DEFAULT_L_BALL_PRECISION	2
protected static final int	DEFAULT_L_BOND_SLICE_PRECISION	6
protected static final int	DEFAULT_L_JOINT_PRECISION	2
protected static final int	DEFAULT_L_SPACEFILL_PRECISION	3
protected static final int	DEFAULT_L_STICK_SLICE_PRECISION	14
protected static final double	DEFAULT_LINE_WIDTH	2.0
protected static final int	DEFAULT_M_BALL_PRECISION	3
protected static final int	DEFAULT_M_BOND_SLICE_PRECISION	8
protected static final int	DEFAULT_M_JOINT_PRECISION	3
protected static final int	DEFAULT_M_SPACEFILL_PRECISION	4
protected static final int	DEFAULT_M_STICK_SLICE_PRECISION	18
protected static final double	DEFAULT_STICK_RADIUS	0.3
protected static final boolean	DISPLAY_BOND_ORDER	true
protected static final int	DRAW_TYPE_BALL	3
protected static final int	DRAW_TYPE_BALL_AND_STICK	6
protected static final int	DRAW_TYPE_BALL_AND_WIRE	5
protected static final int	DRAW_TYPE_SPACEFILL	7
protected static final int	DRAW_TYPE_STICK	4
protected static final int	DRAW_TYPE_WIRE	2
public static final int	LONE_PAIR_TYPE	130
protected static final boolean	SCALED_BALLS	false
protected static final boolean	SMOOTH_STICKS	false

chemaxon.marvin.space.PharmacophorePoint

Modifier and Type	Constant Field	Value
public static final int	ACCEPTOR_TYPE	1
public static final int	ANIONIC_TYPE	4
public static final int	AROMATIC_TYPE	32
public static final int	CATIONIC_TYPE	8
public static final float	DEFAULT_RADIUS	1.0f
public static final int	DONOR_TYPE	2
public static final int	EXCLUDED_TYPE	4096
public static final int	HYDROPHOBIC_TYPE	16
public static final int	UNKONWN_TYPE	0

chemaxon.marvin.space.SurfaceColoring

Modifier and Type	Constant Field	Value
public static final int	ATOM_PROPERTY_MAPPING	1
public static final int	BUILT_IN_CHAIN_MAPPING	4
public static final int	BUILT_IN_CPK_MAPPING	2
public static final int	BUILT_IN_RAINBOW_MAPPING	6
public static final int	BUILT_IN_RESIDUE_MAPPING	3
public static final int	BUILT_IN_SECONDARY_STRUCTURE_MAPPING	5
public static final int	COLOR_MAPPER_BLUE_TO_GREEN	4
public static final int	COLOR_MAPPER_BLUE_TO_RED	1
public static final int	COLOR_MAPPER_FIRE	6
public static final int	COLOR_MAPPER_GREEN_TO_BLUE	5
public static final int	COLOR_MAPPER_RAINBOW	2
public static final int	COLOR_MAPPER_RED_TO_BLUE	0
public static final int	COLOR_MAPPER_REVERSE_RAINBOW	3
public static final int	DECREASE_LINEAR	2
public static final int	DECREASE_RECIPROCAL_SQUARE	8
public static final int	DECREASE_SQUARE	4
public static final int	DISTANCE_CONSTANT	3
public static final int	DISTANCE_FROM_VDW	1
public static final int	DISTANCE_FROM_VDW_EXTENDED	2
public static final int	DISTANCE_WEIGHTED	3
public static final int	GRID_MAPPING	0
public static final int	MEAN_VALUE	2
public static final int	NEAREST_VALUE	0
public static final int	NO_DECREASE	1
public static final int	RADIUS_CONSTANT	3
public static final int	RADIUS_VDW	1
public static final int	RADIUS_VDW_EXTENDED	2
public static final int	SUM_OF_VALUES	1

chemaxon.marvin.space.SurfaceComponent

Modifier and Type	Constant Field	Value
public static final int	DOTTED_TYPE	1
public static final int	FILLED_TYPE	3
public static final int	MESH_TYPE	2
public static final int	TRANSPARENT_TYPE	4

chemaxon.marvin.space.monitor.Control

Modifier and Type	Constant Field	Value
protected static final int	DEFAULT_SIZE	15

chemaxon.marvin.space.monitor.Label

Modifier and Type	Constant Field	Value
public static final int	BACKGROUND_MODE_NONE	0
public static final int	BACKGROUND_MODE_OWN_COLOR	1
public static final int	BORDER_MODE_BRIGHTER_FOREGROUND	3
public static final int	BORDER_MODE_FOREGROUND_COLOR	2
public static final int	BORDER_MODE_NONE	0
public static final int	BORDER_MODE_OWN_COLOR	1
protected static final int	ITEM_COUNT	1
public static final int	LARGE_FONT_SIZE	8
public static final int	MEDIUM_FONT_SIZE	7
public static final int	SMALL_FONT_SIZE	6

chemaxon.marvin.util.CopyOptConstants

Modifier and Type	Constant Field	Value
public static final java.lang.String	COPY_AS_IMAGE_BITMAP	"bitmap"
public static final java.lang.String	COPY_AS_IMAGE_EMF	"emf"
public static final java.lang.String	COPY_AS_OLE	"ole"
public static final java.lang.String	COPY_AS_TEXT	"text"
public static final java.lang.String	FMT_EMF	"emf"
public static final java.lang.String	FMT_IMAGE	"image"
public static final java.lang.String	FMT_MOL	"mol"
public static final java.lang.String	FMT_MRV	"mrv"
public static final java.lang.String	FMT_OLE	"ole"
public static final java.lang.String	FMT_PLAINTEXT	"PlainText"
public static final java.lang.String	FMT_RXN	"rxn"
public static final java.lang.String	FMT_SMILES	"smiles"
public static final java.lang.String	FMT_STRING	"String"
public static final java.lang.String	FMT_STRUCTURE	"structure"

chemaxon.marvin.util.OptionDescriptor

Modifier and Type	Constant Field	Value
public static final int	BOOL	0
public static final int	NONNEGATIVE_REAL	1

chemaxon.marvin.util.codeassist.CodeAssistFactory

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_FACTORY_INSTANCE	"AlchemistCodeAssistFactory_Instance"

chemaxon.marvin.view.ViewParameterConstants

Modifier and Type	Constant Field	Value
public static final java.lang.String	ANIMATE	"animate"
public static final java.lang.String	ANIMATION_DELAY	"animDelay"
public static final java.lang.String	ANIMATION_FPS	"animFPS"
public static final java.lang.String	ANIMATION_SYNCHRONIZATION	"animSync"
public static final java.lang.String	ATOM_SET	"atomSet"
public static final java.lang.String	AUTO_TAB_SCALE	"autoTabScale"
public static final java.lang.String	BACKGROUND	"background"
public static final java.lang.String	BOND_SET	"bondSet"
public static final java.lang.String	BORDER	"border"
public static final java.lang.String	CELL	"cell"
public static final java.lang.String	COLS	"cols"
public static final java.lang.String	CONFIRM_TRANSFER	"confirmTransfer"
public static final java.lang.String	DETACHABLE	"detachable"
public static final java.lang.String	DRAGGABLE	"draggable"
public static final java.lang.String	EDITABLE	"editable"
public static final java.lang.String	GRAPH_INVARIANTS	"grinv"
public static final java.lang.String	IMPORT_ENABLED	"importEnabled"
public static final java.lang.String	LAYOUT	"layout"
public static final java.lang.String	LAYOUT_HEADER	"layoutH"
public static final java.lang.String	LISTEN_MOUSE_EVENT	"listenmouseevent"
public static final java.lang.String	MOLECULE_CHANGED	"molChanged"
public static final java.lang.String	NAVIGATION_MODE	"navmode"
public static final java.lang.String	PARAMETERS	"param"
public static final java.lang.String	PARAMETERS_HEADER	"paramH"
public static final java.lang.String	ROWS	"rows"
public static final java.lang.String	SCRIPT	"script"
public static final java.lang.String	SELECTABLE	"selectable"
public static final java.lang.String	SELECTED_INDEX	"selectedIndex"
public static final java.lang.String	SELECTION	"selection"
public static final java.lang.String	SPIN	"spin"
public static final java.lang.String	TAB_SCALE	"tabScale"
public static final java.lang.String	VALENCE_ERROR_VISIBLE_IN_VIEW	"valenceErrorVisibleInView"
public static final java.lang.String	VIEW_CARBON_VISIBILITY	"viewCarbonVisibility"
public static final java.lang.String	VIEW_LIGAND_ORDER_VISIBILITY	"viewLigandOrderVisibility"
public static final java.lang.String	VIEW_PANEL_LAST_HEIGHT	"viewLastHeight"
public static final java.lang.String	VIEW_PANEL_LAST_WIDTH	"viewLastWidth"
public static final java.lang.String	VISIBLE_COLS	"visibleCols"
public static final java.lang.String	VISIBLE_ROWS	"visibleRows"
public static final java.lang.String	WINDOW_SCALE	"winScale"

chemaxon.marvin.view.swing.TableOptions

Modifier and Type	Constant Field	Value
public static final int	MMF_FIELD	1
public static final int	MMF_NOT_FIELD	2
public static final int	MMF_UNSET	0
public static final int	VH_AUTO	0
public static final int	VH_GRIDBAG	1
public static final int	VH_SPREADSHEET	2

chemaxon.naming.*

chemaxon.naming.document.DocumentToStructure

Modifier and Type	Constant Field	Value
public static final java.lang.String	BYTE	"byte"
public static final java.lang.String	CHARACTER	"character"
public static final java.lang.String	CONFIDENCE	"confidence"
public static final java.lang.String	CONTEXT	"context"
public static final java.lang.String	CONTEXT_INDEX	"context index"
public static final java.lang.String	DOC_AUTHOR	"author"
public static final java.lang.String	DOC_CREATION_DATE	"creation date"
public static final java.lang.String	DOC_LAST_AUTHOR	"last author"
public static final java.lang.String	DOC_PATENT_ASSIGNEES	"assignees"
public static final java.lang.String	DOC_PATENT_ID	"patent ID"
public static final java.lang.String	DOC_PATENT_INVENTORS	"inventors"
public static final java.lang.String	DOC_PATENT_IPC	"IPC"
public static final java.lang.String	DOC_PATENT_IPCR	"IPCR"
public static final java.lang.String	DOC_TITLE	"title"
public static final java.lang.String	DOCUMENT	"document"
public static final java.lang.String	END_CHARACTER	"end"
public static final java.lang.String	IDENTIFIER	"identifier"
public static final java.lang.String	PAGE	"page"
public static final java.lang.String	SECTION	"section"
public static final java.lang.String	SOURCE_TEXT	"text"
public static final java.lang.String	TYPE	"type"
public static final java.lang.String	TYPE_CAS	"CAS#"
public static final java.lang.String	TYPE_CDX	"cdx"
public static final java.lang.String	TYPE_COMMON	"common"
public static final java.lang.String	TYPE_EC	"EC"
public static final java.lang.String	TYPE_GENERIC	"generic"
public static final java.lang.String	TYPE_INCHI	"InChI"
public static final java.lang.String	TYPE_ION	"ion"
public static final java.lang.String	TYPE_MRV	"mrv"
public static final java.lang.String	TYPE_OSR	"OSR"
public static final java.lang.String	TYPE_PEPTIDE	"peptide"
public static final java.lang.String	TYPE_SMILES	"smiles"
public static final java.lang.String	TYPE_SYMYX	"symyx"
public static final java.lang.String	TYPE_SYSTEMATIC	"systematic"

chemaxon.naming.document.annotate.DocumentAnnotator

Modifier and Type	Constant Field	Value
public static final java.lang.String	MOL_UID_PROPERTY	"UID"

chemaxon.pharmacophore.*

chemaxon.pharmacophore.PMapper

Modifier and Type	Constant Field	Value
public static final java.lang.String	DEFAULT_TAG_NAME	"PMAP"

chemaxon.reaction.*

chemaxon.reaction.ConcurrentReactorProcessor

Modifier and Type	Constant Field	Value
public static final int	MODE_COMBINATORIAL	1
public static final int	MODE_SEQUENTIAL	0

chemaxon.reaction.Reactor

Modifier and Type	Constant Field	Value
public static final double	DEF_TOLERANCE	1.0E-4
public static final int	FUSED_REACTION_OUTPUT	4
public static final int	IGNORE_REACTIVITY	1
public static final int	IGNORE_SELECTIVITY	2
public static final int	IGNORE_TOLERANCE	4
public static final int	MAPPING_STYLE_CHANGING	1
public static final int	MAPPING_STYLE_COMPLETE	2
public static final int	MAPPING_STYLE_MATCHING	3
public static final int	MAPPING_STYLE_NONE	0
public static final java.lang.String	MINOR_PRODUCT_TAG	"CXN_REACTOR_MINOR_PRODUCT"
public static final int	NO_DUPLICATE_FILTERING	0
public static final int	ORDER_INSENSITIVE_DUPLICATE_FILTERING	2
public static final int	ORDER_SENSITIVE_DUPLICATE_FILTERING	1
public static final int	PRODUCT_OUTPUT	0
public static final int	REACTION_OUTPUT	1

chemaxon.sss.*

chemaxon.sss.SearchConstants

Modifier and Type	Constant Field	Value
public static final int	ABS_STEREO_ALWAYS_ON	2
public static final int	ABS_STEREO_CHIRAL_FLAG	1
public static final int	ABS_STEREO_TABLE_OPTION	0
public static final int	ATTACHED_DATA_MATCH_EXACT	2
public static final int	ATTACHED_DATA_MATCH_GENERAL	1
public static final int	ATTACHED_DATA_MATCH_IGNORE	0
public static final int	ATTACHMENT_ATOM	4
public static final int	ATTACHMENT_LABEL	3
public static final int	ATTACHMENT_MAP	2
public static final int	ATTACHMENT_NONE	0
public static final int	ATTACHMENT_POINT	1
public static final int	ATTACHMENT_RLABEL	5
public static final int	CHARGE_MATCHING_DEFAULT	0
public static final int	CHARGE_MATCHING_EXACT	1
public static final int	CHARGE_MATCHING_IGNORE	2
public static final float	DEFAULT_DISSIMILARITY_THRESHOLD	0.30000001192092896f
public static final int	DEFAULT_SEARCHTYPE	2
public static final java.lang.String	DISSIMILARITY_PROPERTY_NAME	"dissimilarity"
public static final int	DUPLICATE	5
public static final int	FULL	4
public static final int	FULL_FRAGMENT	7
public static final int	HCOUNT_MATCHING_AUTO	0
public static final int	HCOUNT_MATCHING_EQUAL	1
public static final int	HCOUNT_MATCHING_GREATER_OR_EQUAL	2
public static final int	HIT_EXCLUDEDQ	-2147483641
public static final int	HIT_LP	-2147483644
public static final int	HIT_MULTICENTER	-2147483646
public static final int	HIT_NON_R	-2147483642
public static final int	HIT_ORDERING_NONE	0
public static final int	HIT_ORDERING_UNDEF_R_MATCHING_GROUP_FIRST	1
public static final int	HIT_R	-2147483647
public static final int	HIT_R_EMPTY_MATCH	-2147483643
public static final int	HIT_UNMAPABLE	-2147483645
public static final int	IMPLICIT_H_MATCHING_DEFAULT	0
public static final int	IMPLICIT_H_MATCHING_DISABLED	2
public static final int	IMPLICIT_H_MATCHING_ENABLED	1
public static final int	IMPLICIT_H_MATCHING_IGNORE	3
public static final int	ISOTOPE_MATCHING_DEFAULT	0
public static final int	ISOTOPE_MATCHING_EXACT	1
public static final int	ISOTOPE_MATCHING_IGNORE	2
public static final int	MARKUSH_HIT_INNER	1
public static final int	MARKUSH_HIT_ORIGINAL	0
public static final int	MATCH_COUNT_BETWEEN	0
public static final int	MATCH_COUNT_RELATION	1
public static final int	NO_ABAS	1
public static final int	NO_SCREEN	0
public static final int	POSITION_ON_0TH_HEAVY_ATOM	-2147483648
public static final int	RADICAL_MATCHING_DEFAULT	0
public static final int	RADICAL_MATCHING_EXACT	1
public static final int	RADICAL_MATCHING_IGNORE	2
public static final int	SIMILARITY	3
public static final int	STEREO_DIASTEREOMER	3
public static final int	STEREO_ENANTIOMER	4
public static final int	STEREO_EXACT	2
public static final int	STEREO_IGNORE	1
public static final int	STEREO_MODEL_COMPREHENSIVE	1
public static final int	STEREO_MODEL_DEFAULT	3
public static final int	STEREO_MODEL_GLOBAL	2
public static final int	STEREO_MODEL_LOCAL	0
public static final int	STEREO_SPECIFIC	0
public static final int	SUBSTRUCTURE	2
public static final int	SUPERSTRUCTURE	6
public static final int	TAUTOMER_SEARCH_DEFAULT	2
public static final int	TAUTOMER_SEARCH_OFF	0
public static final int	TAUTOMER_SEARCH_ON	1
public static final int	TAUTOMER_SEARCH_ON_IGNORE_TAUTOMERSTEREO	3
public static final int	UNDEF_R_MATCHING_ALL	0
public static final int	UNDEF_R_MATCHING_GROUP	2
public static final int	UNDEF_R_MATCHING_GROUP_H	3
public static final int	UNDEF_R_MATCHING_GROUP_H_EMPTY	4
public static final int	UNDEF_R_MATCHING_UNDEF_R	1
public static final int	VAGUE_BOND_DEFAULT	5
public static final int	VAGUE_BOND_LEVEL_HALF	5
public static final int	VAGUE_BOND_LEVEL1	1
public static final int	VAGUE_BOND_LEVEL2	2
public static final int	VAGUE_BOND_LEVEL3	3
public static final int	VAGUE_BOND_LEVEL4	4
public static final int	VAGUE_BOND_OFF	0

chemaxon.sss.formula.FormulaSearch

Modifier and Type	Constant Field	Value
public static final int	EXACT	1
public static final int	EXACT_SUBFORMULA	2
public static final int	NONE	0
public static final int	SUBFORMULA	3

chemaxon.sss.screen.HashCode

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_RECURSION_LEVEL	4

chemaxon.sss.search.MarkushFeature

Modifier and Type	Constant Field	Value
public static final int	ATOMLIST	1
public static final int	BONDLIST	2
public static final int	LINKNODE	3
public static final int	MULTIBOND	4
public static final int	REPUNIT	5
public static final int	RGROUP	6

chemaxon.sss.search.MarkushGenerator

Modifier and Type	Constant Field	Value
public static final java.lang.String	NO_UNDEF_RGROUP	"The query should contain at least one undefined R-atom."

chemaxon.sss.search.MolComparator

Modifier and Type	Constant Field	Value
public static final int	MAYBE_USEFUL	1
public static final int	NOT_USEFUL	2
public static final int	USEFUL	0

chemaxon.sss.search.RGroupDecomposition

Modifier and Type	Constant Field	Value
public static final int	COL_MOLECULE	1
public static final int	COL_SCAFFOLD	2
public static final int	HEADER_MAP	2
public static final int	HEADER_NONE	0
public static final int	HEADER_RGROUP	1
public static final java.lang.String	SEPARATOR	";"

chemaxon.sss.search.SearchOptions

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_TIMEOUT_LIMIT	120000

chemaxon.sss.search.options.MarkushAromaticityHandlingOption

Modifier and Type	Constant Field	Value
public static final java.lang.String	OPTION_NAME_STRING	"markushAromHandling"

chemaxon.sss.search.options.TargetHomologyMatchingMode

Modifier and Type	Constant Field	Value
public static final java.lang.String	OPTION_NAME_STRING	"targetHomologyMatchingMode"

chemaxon.standardizer.*

chemaxon.standardizer.AbstractStandardizerAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	CONFIG_PATH_KEY	"configPath"
public static final java.lang.String	FORMAT_KEY	"format"
public static final java.lang.String	ID_KEY	"id"

chemaxon.standardizer.Standardizer

Modifier and Type	Constant Field	Value
public static final java.lang.String	FINAL_CLEAN_ID	"FINAL_CLEAN"

chemaxon.standardizer.StandardizerActionDescriptor

Modifier and Type	Constant Field	Value
public static final java.lang.String	ACTIONSTRING_TOKEN	"actionStringToken"
public static final java.lang.String	DESCRIPTION	"description"
public static final java.lang.String	EDITOR_CLASS_NAME	"editorClassName"
public static final java.lang.String	HELP_TEXT	"helpText"
public static final java.lang.String	ICON_PATH	"iconPath"
public static final java.lang.String	ID	"id"
public static final java.lang.String	NAME	"name"
public static final java.lang.String	TAGS	"tags"
public static final java.lang.String	XML_TOKEN	"xmlToken"

chemaxon.standardizer.StandardizerActionFactory

Modifier and Type	Constant Field	Value
public static final java.lang.String	DEFAULT	"default"
public static final java.lang.String	DEFAULT_CONFIGURATION_PATH	"/chemaxon/standardizer/resource/defaultstandardizerconfig.xml"
public static final java.lang.String	DEFAULT_CONFIGURATION_SCHEMA	"/chemaxon/standardizer/resource/availableStandardizerConfiguration.xsd"
public static final java.lang.String	PRE_CONFIGURED_TRANSFORMATIONS	"/chemaxon/standardizer/resource/preconfiguredtransformations.xml"
public static final java.lang.String	STANDARDIZERCONFIG_XML	"standardizerconfig.xml"
public static final java.lang.String	USER_DEFINED_STANDARDIZERCONFIG_XML	"userdefinedstandardizers.xml"

chemaxon.standardizer.StandardizerActionInfo

Modifier and Type	Constant Field	Value
public static final java.lang.String	NO_LICENSE_REQUIRED	"no license"

chemaxon.standardizer.actions.AbsoluteStereoAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	ACT_KEY	"act"
public static final java.lang.String	TYPE_KEY	"type"

chemaxon.standardizer.actions.AliasToGroupAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	ABBREV_GROUPS_KEY	"Groups"

chemaxon.standardizer.actions.AromatizeAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	TYPE_KEY	"type"

chemaxon.standardizer.actions.ClearStereoAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_CHIRALITY	"Chirality"
public static final java.lang.String	PROPERTY_KEY_DOUBLE_BOND	"DoubleBond"
public static final java.lang.String	PROPERTY_KEY_SINGLE_UP_OR_DOWN_BOND	"SingleUpOrDownBond"
public static final java.lang.String	TYPE_KEY	"type"

chemaxon.standardizer.actions.ConvertDoubleBondsAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	TYPE_KEY	"type"

chemaxon.standardizer.actions.ConvertToEnhancedStereoAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_ABSOLUTE	"absolute"
public static final java.lang.String	PROPERTY_KEY_ABSSTEREO	"absstereo"
public static final java.lang.String	PROPERTY_KEY_STEREO_GROUP	"defaultnonabsstereogroup"
public static final java.lang.String	PROPERTY_KEY_TYPE	"type"

chemaxon.standardizer.actions.ExpandAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	STOICHIOMETRY_KEY	"data"

chemaxon.standardizer.actions.MapAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	KEEP_MAPPING	"KeepMapping"
public static final java.lang.String	MAPPING_STYLE	"MappingStyle"
public static final java.lang.String	MARK_BONDS	"MarkBonds"

chemaxon.standardizer.actions.MapReactionAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	KEEP_MAPPING	"KeepMapping"
public static final java.lang.String	MAPPING_STYLE	"MappingStyle"
public static final java.lang.String	MARK_BONDS	"MarkBonds"

chemaxon.standardizer.actions.RemoveExplicitHydrogensAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_BRIDGEHEAD	"Bridgehead"
public static final java.lang.String	PROPERTY_KEY_CHARGED	"Charged"
public static final java.lang.String	PROPERTY_KEY_H_CONNECTED	"Hconnected"
public static final java.lang.String	PROPERTY_KEY_ISOTOPIC	"Isotopic"
public static final java.lang.String	PROPERTY_KEY_LONELY	"Lonely"
public static final java.lang.String	PROPERTY_KEY_MAPPED	"Mapped"
public static final java.lang.String	PROPERTY_KEY_METAL_CONNECTED	"Metalconnected"
public static final java.lang.String	PROPERTY_KEY_POLYMER_END_GROUP	"Polymerendgroup"
public static final java.lang.String	PROPERTY_KEY_RADICAL	"Radical"
public static final java.lang.String	PROPERTY_KEY_SGROUP	"Sgroup"
public static final java.lang.String	PROPERTY_KEY_SGROUP_END	"Sgroupend"
public static final java.lang.String	PROPERTY_KEY_VALENCE_ERROR	"Valenceerror"
public static final java.lang.String	PROPERTY_KEY_WEDGED	"Wedged"

chemaxon.standardizer.actions.RemoveFragmentAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	MEASUREMENT_KEY	"measure"
public static final java.lang.String	METHOD_KEY	"method"

chemaxon.standardizer.actions.ReplaceAtomsAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROPERTY_KEY_ALLOW_VALENCE_ERROR	"allowvalenceerror"
public static final java.lang.String	PROPERTY_KEY_QUERY_ATOM	"queryatom"
public static final java.lang.String	PROPERTY_KEY_REPLACE_ATOM	"replaceatom"

chemaxon.standardizer.actions.SetHydrogenIsotopeSymbolAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	TYPE_KEY	"type"

chemaxon.standardizer.advancedactions.Clean2DAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	PARTIAL_CLEAN_KEY	"partialcleanneeded"
public static final java.lang.String	TEMPLATE_FILE_KEY	"templatefile"
public static final java.lang.String	TEMPLATES_KEY	"templates"
public static final java.lang.String	TYPE_KEY	"type"

chemaxon.standardizer.advancedactions.CreateGroupAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	GROUP_LIST_KEY	"grouplist"

chemaxon.standardizer.advancedactions.RemoveSolventsAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	DEFAULT_SOLVENT_DICTIONARY_PATH	"/chemaxon/standardizer/resource/solvent_dictionary.sdf"
public static final java.lang.String	SOLVENT_ID_PROPERTY	"ID"
public static final java.lang.String	SOLVENT_LIST_KEY	"solventlist"
public static final java.lang.String	USE_DEFAULT_SOLVENTS_KEY	"usedefaultsolvents"

chemaxon.standardizer.advancedactions.StripSaltsAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	DEFAULT_SALT_DICTIONARY_PATH	"/chemaxon/standardizer/resource/salt_dictionary.sdf"
public static final java.lang.String	DONT_REMOVE_LAST_COMPONENT_KEY	"dontremovelastcomponent"
public static final java.lang.String	SALT_ID_PROPERTY	"ID"
public static final java.lang.String	SALT_LIST_KEY	"saltlist"
public static final java.lang.String	USE_DEFAULT_SALTS_KEY	"usedefaultsalts"

chemaxon.standardizer.advancedactions.TransformAction

Modifier and Type	Constant Field	Value
public static final java.lang.String	EXACT_KEY	"exact"
public static final java.lang.String	SEARCH_OPTIONS_KEY	"searchoptions"
public static final java.lang.String	STRUCTURE_KEY	"structure"

chemaxon.standardizer.configuration.reader.StandardizerActionStringReader

Modifier and Type	Constant Field	Value
public static final java.lang.String	ENTRY_SEPARATOR	"\\.\\."
public static final java.lang.String	GROUP_END_TOKEN	"}"
public static final java.lang.String	GROUP_SEPARATOR	","
public static final java.lang.String	GROUP_START_TOKEN	"{"
public static final java.lang.String	KEY_VALUE_SEPARATOR	"="
public static final java.lang.String	PARAM_SEPARATOR	":"

chemaxon.standardizer.configuration.reader.StandardizerConfigurationReader

Modifier and Type	Constant Field	Value
public static final java.lang.String	DEFAULT_STANDARDIZERS_CONFIG_PATH	"/chemaxon/standardizer/resource/default.xml"

chemaxon.struc.*

chemaxon.struc.HybridizationStateConsts

Modifier and Type	Constant Field	Value
public static final int	HS_S	1
public static final int	HS_SP	2
public static final int	HS_SP2	3
public static final int	HS_SP3	4
public static final int	HS_UNKNOWN	0

chemaxon.struc.MDocument

Modifier and Type	Constant Field	Value
public static final int	SETCOLOR_COLORLESS	2
public static final int	SETCOLOR_DEFAULT	0
public static final int	SETCOLOR_SPECIFIED	1

chemaxon.struc.MObject

Modifier and Type	Constant Field	Value
public static final int	TRANSFORM_DISTORT	1

chemaxon.struc.MolAtom

Modifier and Type	Constant Field	Value
public static final int	AAMAP_MASK	268173312
public static final int	AAMAP_MAX	1023
public static final int	AAMAP_OFF	18
public static final int	ALIPHATIC	2
public static final int	ALL_H	49151
public static final double	ANGLE_STEP	0.2617993877991494
public static final int	ANY	131
public static final int	AROMATIC	1
public static final int	AROMATIC_OR_ALIPHATIC	3
public static final int	ATOM_TYPE_COUNT	139
public static final int	ATOM_TYPE_MAX	138
public static final int	ATTACH_BOTH	3
public static final int	ATTACH_NONE	0
public static final int	ATTACH_UNKNOWN	-1
public static final int	ATTACH1	1
public static final int	ATTACH2	2
public static final int	BRIDGEHEAD_H	4096
public static final int	CHARGED_H	4
public static final int	CTSPECIFIC_H	128
public static final int	ELEMENT_COUNT	118
public static final int	EMPTY	0
public static final int	FIX_CHARGE	65536
public static final int	HBONDED_H	8192
public static final int	HCONNECTED_H	64
public static final int	HETERO	132
public static final int	HS_S	1
public static final int	HS_SP	2
public static final int	HS_SP2	3
public static final int	HS_SP3	4
public static final int	HS_UNKNOWN	0
public static final int	ISOTOPE_H	2
public static final int	LDIR_ABOVE	2
public static final int	LDIR_BELOW	3
public static final int	LDIR_LEFT	1
public static final int	LDIR_RIGHT	0
public static final int	LIST	128
public static final int	LONELY_H	1
public static final int	LP	130
public static final int	MAPPED_H	16
public static final int	METALCONNECTED_H	32768
public static final int	MULTICENTER	137
public static final int	NOTLIST	129
public static final int	OMIT_POSTCLEAN	16384
public static final int	POLYMERENDGROUP_H	256
public static final int	PSEUDO	136
public static final int	RAD_COUNT_MASK	3072
public static final int	RAD_MASK	15360
public static final int	RAD_OFF	10
public static final int	RAD1	1
public static final int	RAD2	2
public static final int	RAD2_SINGLET	6
public static final int	RAD2_TRIPLET	10
public static final int	RAD3	3
public static final int	RAD3_DOUBLET	7
public static final int	RAD3_QUARTET	11
public static final int	RAD4	4
public static final char	RADICAL_CHAR	8226
public static final int	RADICAL_H	8
public static final int	RESSEQ_MAX	8191
public static final int	RESTYPE_MAX	63
public static final int	RGROUP	134
public static final int	RGROUP_ATTACHMENT	138
public static final int	RGROUP_MAX	32767
public static final int	RXNSTEREO_INVERSION	1
public static final int	RXNSTEREO_NONE	0
public static final int	RXNSTEREO_RETENTION	2
public static final int	SETSEQ_MAX	63
public static final int	SGROUP	135
public static final int	SGROUP_H	2048
public static final int	SGROUPEND_H	512
public static final int	SMARTS_H_DAYLIGHT_COMP_MODE	1
public static final int	SMARTS_H_MARVIN_COMP_MODE	0
public static final int	STAR	133
public static final int	SYM_CX	64
public static final int	SYM_EXPLH	4
public static final int	SYM_IMPLH	2
public static final int	SYM_MOLEX	32
public static final int	SYM_NEUTRAL	8
public static final int	SYM_SMARTS	16
public static final int	SYM_SQBRACKETS	1
public static final int	UNSPECIFIED_AROMATICITY	0
public static final int	VALENCE_CHECKED	16384
public static final int	VALENCE_ERROR	32768
public static final int	VALENCEERROR_H	1024
public static final int	WEDGED_H	32

chemaxon.struc.MolBond

Modifier and Type	Constant Field	Value
public static final int	ANY	0
public static final int	AROMATIC	4
public static final int	BOLD	1073741824
public static final double	CCLENGTH	1.54
public static final int	CONJUGATED	8
public static final int	COORDINATE	9
public static final int	DOUBLE_OR_AROMATIC	7
public static final int	DOWN	32
public static final int	HASHED	-2147483648
public static final int	HYDROGEN	10
public static final int	RC_CHANGE	12288
public static final int	RC_MAKE_AND_CHANGE	16384
public static final int	RC_MAKE_OR_BREAK	8192
public static final int	RC_NOT_CENTER	20480
public static final int	RC_NOT_MODIFIED	24576
public static final int	RC_REACTING_CENTER	4096
public static final int	RC_UNMAPPED	28672
public static final int	REACTING_CENTER_MASK	61440
public static final int	SETSEQ_MAX	63
public static final int	SETSEQ_OFF	24
public static final int	SINGLE_OR_AROMATIC	6
public static final int	SINGLE_OR_DOUBLE	5
public static final int	STEREO_MASK	1008
public static final int	STEREO1_MASK	48
public static final int	STEREO2_CARE	512
public static final int	TOPOLOGY_CHAIN	2048
public static final int	TOPOLOGY_MASK	3072
public static final int	TOPOLOGY_RING	1024
public static final int	TYPE_MASK	15
public static final int	UP	16
public static final int	WAVY	48

chemaxon.struc.Molecule

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_UNGROUP	0
public static final int	RECURSIVE_UNGROUP	1
public static final int	RM_KEEP_LEAVINGGROUPS	128
public static final int	RMCLEANUP_FROMSGROUPS	16
public static final int	RMCLEANUP_SGROUPATOMS	8
protected static final int	RMSG_DEFAULT	0
protected static final int	RMSG_KEEP_CHILDREN	1
protected static final int	RMSG_KEEP_MULTICENTER	4
protected static final int	RMSG_KEEP_PARENT	2

chemaxon.struc.MoleculeGraph

Modifier and Type	Constant Field	Value
public static final int	AROM_AMBIGUOUS	5
public static final int	AROM_BASIC	1
public static final int	AROM_CHUCKEL	6
public static final int	AROM_GENERAL	2
public static final int	AROM_LOOSE	3
public static final int	AROM_SUBSTRUCTURE	4
protected static final int	AUTO_UNGROUP	16
public static final int	CACHE_REMOVE_ALL	0
public static final int	CACHE_REMOVE_AROMATAMODULE	8
public static final int	CACHE_REMOVE_CACHEMEMORY	1
public static final int	CACHE_REMOVE_GRINVMODULE	2
public static final int	CACHE_REMOVE_PARITYMODULE	4
public static final int	CACHE_REMOVE_SSSRMODULE	16
public static final int	CACHE_REMOVE_TABS	32
public static final int	DEAROM_GENERAL	0
public static final int	DEAROM_HUCKELCHECK	1
public static final int	DEAROM_HUCKELCHECK_EX	2
protected static final int	DIM_MASK	3
public static final int	FRAG_BASIC	0
public static final int	FRAG_KEEPING_MULTICENTERS	1
public static final int	FRAG_KEEPING_SGROUPS	2
public static final int	FRAG_TYPE_COUNT	3
public static final int	GRINV_DONT_STORE	8
public static final int	GRINV_NOHYDROGEN	1
public static final int	GRINV_OLDSTEREO	4
public static final int	GRINV_STEREO	2
public static final int	GRINV_USEMAPS	32
public static final int	GRINV_VALUE_OPTIONS	39
protected static final int	INITIAL_CAPACITY	32
public static final java.lang.String	INVALID_LINKNODE_MESSAGE	"Link node cannot be created from the specified configuration!"
public static final int	MIN_RING_SIZE_FOR_TRANS_DB	8
public static final int	OMIT_POSTCLEAN	16384
public static final int	RMCLEANUP_ALL	-161
public static final int	RMCLEANUP_EDGES	1
protected static final int	RMCLEANUP_FIXCOMPONENT	32
public static final int	RMCLEANUP_MOBJECT	4
public static final int	RMCLEANUP_NONE	0
public static final int	RMCLEANUP_PARENTDOC	64
public static final int	RMCLEANUP_STEREO	2
protected static final int	VALENCE_CHECK	32
protected static final int	VALENCE_CHECK_AMBIGUOUS	64

chemaxon.struc.MProp

Modifier and Type	Constant Field	Value
public static final int	COORDDEP	1
public static final java.lang.String	TYPE_3D_COORDS	"MHCoords3D"
public static final java.lang.String	TYPE_ARRAY_BYTE	"byte"
public static final java.lang.String	TYPE_ARRAY_DOUBLE	"double"
public static final java.lang.String	TYPE_ARRAY_INTEGER	"integer"
public static final java.lang.String	TYPE_BOOLEAN	"boolean"
public static final java.lang.String	TYPE_COLLECTION_HASH	"MHashProp"
public static final java.lang.String	TYPE_COLLECTION_LIST	"MListProp"
public static final java.lang.String	TYPE_CONFORMER_DESCRIPTOR	"chemaxon.marvin.modelling.struc.ConformersDescriptor"
public static final java.lang.String	TYPE_DOUBLE	"double"
public static final java.lang.String	TYPE_FONT	"mfont"
public static final java.lang.String	TYPE_INTEGER	"integer"
public static final java.lang.String	TYPE_MDOCUMENT_PROP	"MDocument"
public static final java.lang.String	TYPE_MOLECULE	"Molecule"
public static final java.lang.String	TYPE_OBJECT	"object"
public static final java.lang.String	TYPE_STRING	"string"
public static final java.lang.String	TYPE_VOLUMETRIC_DATA	"VolumetricData"

chemaxon.struc.NoStructure

Modifier and Type	Constant Field	Value
public static final java.lang.String	LABEL	"\\bold{No Structure}"

chemaxon.struc.RgMolecule

Modifier and Type	Constant Field	Value
public static final java.lang.String	DEFAULT_RLOGIC_RANGE	""
public static final int	RG_ID_MASK	32767
public static final int	RG_ID2_FLAG	32768
public static final int	RG_ID2_MASK	2147418112
public static final int	RG_ID2_OFF	16
public static final int	RG_RESTH	-2147483648

chemaxon.struc.RxnMolecule

Modifier and Type	Constant Field	Value
public static final int	AGENTS	2
public static final int	EQUILIBRIUM	3
public static final int	PRODUCTS	1
public static final int	REACTANTS	0
public static final int	REGULAR_DOUBLE	2
public static final int	REGULAR_SINGLE	0
public static final int	RESONANCE	1
public static final int	RETROSYNTHETIC	2
public static final int	RGROUPED	4
public static final int	TWO_HEADED_DOUBLE	3
public static final int	TWO_HEADED_SINGLE	1
public static final int	TYPE_COUNT	3
public static final int	TYPE_MASK	3

chemaxon.struc.Sgroup

Modifier and Type	Constant Field	Value
public static final int	CHARGE_ON_ATOMS	1
public static final int	CHARGE_ON_GROUP	2
public static final int	PR_ATSYMS	1
protected static final int	RA_IN_EXPAND	1
protected static final int	RA_REMOVE_EXCEPT_RU	2
public static final int	SCN_EITHER_UNKNOWN	0
public static final int	SCN_HEAD_TO_HEAD	1
public static final int	SCN_HEAD_TO_TAIL	2
public static final int	SGROUP_TYPE_COUNT	16
public static final int	SORT_CHILD_PARENT	2
public static final int	SORT_PARENT_CHILD	1
public static final int	SST_ALTERNATING	1
public static final int	SST_BLOCK	3
public static final int	SST_RANDOM	2
public static final int	ST_AMINOACID	16
public static final int	ST_ANY	11
public static final int	ST_COMPONENT	13
public static final int	ST_COPOLYMER	5
public static final int	ST_CROSSLINK	6
public static final int	ST_DATA	10
public static final int	ST_FORMULATION	9
public static final int	ST_GENERIC	12
public static final int	ST_GRAFT	15
public static final int	ST_MER	4
public static final int	ST_MIXTURE	8
public static final int	ST_MODIFICATION	7
public static final int	ST_MONOMER	3
public static final int	ST_MULTICENTER	14
public static final int	ST_MULTIPLE	1
public static final int	ST_SRU	2
public static final int	ST_SUPERATOM	0
public static final int	XSTATE_C	2
public static final int	XSTATE_NONE	0
public static final int	XSTATE_X	1
public static final int	XSTATE_XC	3

chemaxon.struc.Smolecule

Modifier and Type	Constant Field	Value
public static final int	A_ALL	4095
public static final int	A_ASTEREO	3072
public static final int	A_ATOMMAP	256
public static final int	A_BOND	1
public static final int	A_CHARGE	2
public static final int	A_CHIRALITY	2048
public static final int	A_EXPLH	64
public static final int	A_HYBRIDIZATION	8
public static final int	A_IMPLH	32
public static final int	A_MASSNO	16
public static final int	A_PARITY	1024
public static final int	A_RADICAL	4
public static final int	A_RGROUP	512
public static final int	A_VALENCE	128
public static final int	RGROUP_MAX	32767

chemaxon.struc.StereoConstants

Modifier and Type	Constant Field	Value
public static final int	ANTI	1024
public static final int	ATOMSTEREO_EITHER	64
public static final int	ATOMSTEREO_MASK	96
public static final int	ATOMSTEREO_NONE	0
public static final int	ATOMSTEREO_SPECIFIC	32
public static final int	CHIRALITY_M	256
public static final int	CHIRALITY_MASK	24
public static final int	CHIRALITY_P	128
public static final int	CHIRALITY_r	32
public static final int	CHIRALITY_R	8
public static final int	CHIRALITY_s	64
public static final int	CHIRALITY_S	16
public static final int	CHIRALITYSUPPORT_ALL	2
public static final int	CHIRALITYSUPPORT_ALL_POSSIBLE	3
public static final int	CHIRALITYSUPPORT_NONE	0
public static final int	CHIRALITYSUPPORT_SELECTED	1
public static final int	CIS	128
public static final int	CIS_TRANS	192
public static final int	CTUMASK	448
public static final int	CTUNKNOWN	512
public static final int	CTUNSPEC	256
public static final int	DBS_ALL	0
public static final int	DBS_MARKED	1
public static final int	DBS_NONE	2
public static final int	ENDO	2048
public static final int	EXO	4096
public static final int	PARITY_ALLENE	2
public static final int	PARITY_EITHER	3
public static final int	PARITY_EVEN	2
public static final int	PARITY_MASK	7
public static final int	PARITY_NONE	0
public static final int	PARITY_ODD	1
public static final int	PARITY_TETRAHEDRAL	1
public static final int	PARITY_UNSPEC	4
public static final int	STGRP_ABS	1
public static final int	STGRP_AND	3
public static final int	STGRP_NONE	0
public static final int	STGRP_OR	2
public static final int	SYN	512
public static final int	TRANS	64

chemaxon.struc.graphics.MBracket

Modifier and Type	Constant Field	Value
public static final double	ARC_BRACES	75.0
public static final double	ARC_ROUND	90.0
public static final int	T_BRACES	2
public static final int	T_CHEVRONS	3
public static final int	T_DOUBLE	5
public static final int	T_ROUND	0
public static final int	T_SINGLE	4
public static final int	T_SQUARE	1

chemaxon.struc.graphics.MEFlow

Modifier and Type	Constant Field	Value
public static final int	E_SINK	1
public static final int	E_SOURCE	0
public static final java.lang.String	lonePairState	"lonePairState"
public static final java.lang.String	radicalState	"radicalState"

chemaxon.struc.graphics.MEFlowBasePoint

Modifier and Type	Constant Field	Value
public static final java.lang.String	electronRadious	"electronRadious"
public static final java.lang.String	lonePairCoordsLabel	"lonePairCoords"
public static final java.lang.String	lonePairRealCoordsLabel	"lonePairRealCoords"
public static final java.lang.String	radicalCoordsLabel	"radicalCoords"

chemaxon.struc.graphics.MFont

Modifier and Type	Constant Field	Value
public static final int	BOLD	1
public static final int	ITALIC	2
public static final int	PLAIN	0

chemaxon.struc.graphics.MPolyline

Modifier and Type	Constant Field	Value
public static final int	ARROW_BACK_FLAG	1
public static final int	ARROW_CROSSED_FLAG	64
public static final int	ARROW_CURVED_FLAG	128
public static final int	ARROW_DASHED_FLAG	32
public static final int	ARROW_EQUILIBRIUM_FLAG	16
public static final int	ARROW_GROUP1_MASK	24
public static final int	ARROW_GROUP2_MASK	224
public static final int	ARROW_HALF_LEFT	2
public static final int	ARROW_HALF_MASK	6
public static final int	ARROW_HALF_RIGHT	4
public static final int	ARROW_RETROSYNTHETIC_FLAG	8
public static final int	CLOSED_FLAG	1
public static final double	DEFAULT_ARROW_HEAD_LENGTH	0.6
public static final double	DEFAULT_ARROW_HEAD_WIDTH	0.4
public static final double	DEFAULT_EQUILIBRIUM_HEAD_WIDTH	3.5
public static final double	DEFAULT_MAX_CROSS_SIZE	1.75
public static final double	DEFAULT_RETROSYNTHETIC_HEAD_WIDTH	3.0
public static final double	DEFAULT_THICKNESS	0.0625
public static final int	HEAD	1
public static final int	TAIL	0
public static final int	THICKNESS_SET_FLAG	2

chemaxon.struc.graphics.MRectangle

Modifier and Type	Constant Field	Value
public static final int	P_CENTER	4
public static final int	P_E	6
public static final int	P_N	5
public static final int	P_NE	1
public static final int	P_NW	0
public static final int	P_S	7
public static final int	P_SE	2
public static final int	P_SW	3
public static final int	P_W	8
public static final int	T_NOROT	1

chemaxon.struc.graphics.MTextAttributes

Modifier and Type	Constant Field	Value
public static final int	A_ALL	1023
public static final int	A_BOLD	32
public static final int	A_DX	256
public static final int	A_DY	512
public static final int	A_FONT	4
public static final int	A_FONT_BITS	124
public static final int	A_FONTFAMILY	8
public static final int	A_FONTSIZE	16
public static final int	A_FOREGROUND	2
public static final int	A_ITALIC	64
public static final int	A_SCALE	128
public static final int	A_SUBLEVEL	1
public static final double	DEFAULT_SUPERSCRIPT_DELTAY	0.6
public static final double	DEFAULT_SUPERSCRIPT_SCALE	0.7
public static final int	DEFAULT_SUPERSCRIPT_SUBLEVEL	1

chemaxon.struc.graphics.MTextBox

Modifier and Type	Constant Field	Value
public static final int	ALIGN_BOTTOM	2
public static final int	ALIGN_CENTER	1
public static final int	ALIGN_LEFT	0
public static final int	ALIGN_RIGHT	2
public static final int	ALIGN_TOP	0
public static final int	FONT_DEFAULT_SCALE	10

chemaxon.struc.sgroup.DataSgroup

Modifier and Type	Constant Field	Value
public static final int	DT_FORMATTED	1
public static final int	DT_NUMERIC	2
public static final int	DT_TEXT	3
public static final int	DT_UNSPEC	0
public static final int	DT_URL	4
public static final int	HIDDEN	-2

chemaxon.struc.sgroup.Expandable

Modifier and Type	Constant Field	Value
public static final int	COORDS_UPDATE	16
public static final int	DEFAULT_OPTIONS	0
public static final int	FAST_COORDS	8
public static final int	LEAVE_COORDS_UNCHANGED	2
public static final int	MDL_EXPAND	1
public static final int	NONRECURSIVE_EXPAND	4
public static final int	REVERSIBLE_EXPAND	2

chemaxon.struc.sgroup.SgroupAtom

Modifier and Type	Constant Field	Value
public static final int	LABEL_AUTO	-1
public static final int	LABEL_DEFAULT	0

chemaxon.util.*

chemaxon.util.ConnectionHandler

Modifier and Type	Constant Field	Value
public static final java.lang.String	DEFAULT_PROPERTY_TABLE	"JChemProperties"

chemaxon.util.ErrorHandler

Modifier and Type	Constant Field	Value
public static final int	CLASS_NOT_FOUND_ERROR	7
public static final int	DATABASE_SEARCH_ERROR	3
public static final int	ILLEGAL_ACCESS_ERROR	9
public static final int	INSTANTIATION_ERROR	8
public static final int	IO_ERROR	5
public static final int	MAX_SEARCH_FREQUENCY_EXCEEDED_ERROR	2
public static final int	MOL_FORMAT_ERROR	4
public static final int	NO_ERROR	0
public static final int	SQL_ERROR	10
public static final int	UNIDENTIFIED_ERROR	1

chemaxon.util.HitColoringAndAlignmentOptions

Modifier and Type	Constant Field	Value
public static final int	DISSIMILARITY	2
public static final int	MARKUSH_REDUCTION	1
public static final int	MARKUSH_REDUCTION_HGEXPANSION	2
public static final int	ORIGINAL_MARKUSH	0
public static final java.lang.String	QUERY_LABEL	"Query"
public static final int	SIMILARITY	3
public static final java.lang.String	SIMILARITY_LABEL	"Score"
public static final int	SIMILARITY_OFF	1
public static final java.lang.String	TARGET_LABEL	"Target"

chemaxon.util.HitDisplayTool

Modifier and Type	Constant Field	Value
public static final int	HIT_ATOM_SET	1
public static final int	HIT_BOND_SET	0
public static final int	NON_HIT_ATOM_SET	0
public static final int	NON_HIT_BOND_SET	1

chemaxon.util.HitDisplayUtil

Modifier and Type	Constant Field	Value
public static final java.lang.String	PROP_ALIGNHIT	"alignHit"

chemaxon.util.iterator.IteratorFactory

Modifier and Type	Constant Field	Value
public static final int	INCLUDE_ALL_ATOMS	0
public static final int	INCLUDE_ALL_BONDS	0
public static final int	INCLUDE_CHEMICAL_ATOMS	14
public static final int	INCLUDE_CHEMICAL_ATOMS_ONLY	14
public static final int	REPLACE_COORDINATE_BONDS	4
public static final int	SKIP_COORDINATE_BONDS	1
public static final int	SKIP_COVALENT_BONDS	2
public static final int	SKIP_EXPLICIT_H	1
public static final int	SKIP_LONE_PAIR	4
public static final int	SKIP_MULTICENTER	2
public static final int	SKIP_PSEUDO_ATOM	8

com.chemaxon.*

com.chemaxon.calculations.util.CmdlineUtils

Modifier and Type	Constant Field	Value
public static final java.lang.String	UTF8ENCODING	"UTF-8"

com.chemaxon.descriptors.common.BinaryVectors

Modifier and Type	Constant Field	Value
public static final int	BYTES_IN_INT	4
public static final int	BYTES_IN_LONG	8
public static final int	LOG2_BYTES_IN_INT	2
public static final int	LOG2_BYTES_IN_LONG	3

com.chemaxon.descriptors.fingerprints.cfp.CfpParameters

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_BITS_TO_SET_FOR_PATTERNS	3
public static final int	DEFAULT_CFP_LENGTH	1024
public static final int	DEFAULT_CFP_MAX_PATTERN_LENGTH	7
public static final boolean	DEFAULT_CONSIDER_RINGS	true

com.chemaxon.descriptors.fingerprints.ecfp.EcfpParameters

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_ECFP_DIAMETER	4
public static final int	DEFAULT_ECFP_LENGTH	1024

com.chemaxon.descriptors.fingerprints.maccs.MaccsParameters

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_MACCS_LENGTH	192

com.chemaxon.descriptors.vectors.binary.BvParameters

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_LENGTH	1024

com.chemaxon.descriptors.vectors.floats.FvParameters

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_LENGTH	1
public static final double	DEFAULT_SCALED_MAX	1.0
public static final double	DEFAULT_SCALED_MIN	0.0

com.chemaxon.mapper.AutoMapper

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_CACHE_SIZE	1000
public static final java.lang.String	DEFAULT_CACHE_SIZE_PROPERTY	"chemaxon.automapper.AutoMapper.cacheSize"

com.chemaxon.search.mcs.MaxCommonSubstructure

Modifier and Type	Constant Field	Value
public static final long	DEFAULT_RANDOM_SEED	308051301241514L

com.chemaxon.search.mcs.McsSearchOptions

Modifier and Type	Constant Field	Value
public static final int	DEFAULT_MAX_CONSIDERED_RING_SIZE	8