Hierarchy For All Packages

Package Hierarchies:

• chemaxon.calculations,
• chemaxon.calculations.cip,
• chemaxon.calculations.clean,
• chemaxon.calculations.dipole,
• chemaxon.calculations.hydrogenize,
• chemaxon.calculations.nmr,
• chemaxon.calculations.nmr.io,
• chemaxon.calculations.stereo,
• chemaxon.checkers,
• chemaxon.checkers.result,
• chemaxon.checkers.runner,
• chemaxon.checkers.runner.configuration.reader,
• chemaxon.clustering,
• chemaxon.clustering.adapter,
• chemaxon.common.util,
• chemaxon.core,
• chemaxon.core.calculations.stereo,
• chemaxon.core.calculations.valencecheck,
• chemaxon.core.util,
• chemaxon.descriptors,
• chemaxon.descriptors.scalars,
• chemaxon.fixers,
• chemaxon.formats,
• chemaxon.formats.documents.jchemexcel,
• chemaxon.formats.documents.jchemoffice,
• chemaxon.formats.recognizer,
• chemaxon.jchem.db,
• chemaxon.jchem.db.cache,
• chemaxon.jchem.file,
• chemaxon.jep,
• chemaxon.jep.context,
• chemaxon.license,
• chemaxon.marvin,
• chemaxon.marvin.alignment,
• chemaxon.marvin.alignment.atrop,
• chemaxon.marvin.beans,
• chemaxon.marvin.calculations,
• chemaxon.marvin.common,
• chemaxon.marvin.io,
• chemaxon.marvin.io.formats,
• chemaxon.marvin.io.formats.mdl,
• chemaxon.marvin.io.formats.smiles,
• chemaxon.marvin.io.formats.vectgraphics,
• chemaxon.marvin.io.image,
• chemaxon.marvin.io.image.exporter,
• chemaxon.marvin.modules.datatransfer,
• chemaxon.marvin.modules.reaction,
• chemaxon.marvin.paint,
• chemaxon.marvin.paint.constants,
• chemaxon.marvin.plugin,
• chemaxon.marvin.plugin.concurrent,
• chemaxon.marvin.plugin.gui,
• chemaxon.marvin.services,
• chemaxon.marvin.services.httpservice,
• chemaxon.marvin.services.json,
• chemaxon.marvin.services.localservice,
• chemaxon.marvin.services.soap,
• chemaxon.marvin.services.xmlrpcservice,
• chemaxon.marvin.sketch,
• chemaxon.marvin.sketch.swing.modules.documentstyle,
• chemaxon.marvin.space,
• chemaxon.marvin.space.monitor,
• chemaxon.marvin.uif.dialog,
• chemaxon.marvin.util,
• chemaxon.marvin.util.codeassist,
• chemaxon.marvin.view,
• chemaxon.marvin.view.swing,
• chemaxon.naming,
• chemaxon.naming.document,
• chemaxon.naming.document.annotate,
• chemaxon.pharmacophore,
• chemaxon.reaction,
• chemaxon.sss,
• chemaxon.sss.formula,
• chemaxon.sss.screen,
• chemaxon.sss.search,
• chemaxon.sss.search.options,
• chemaxon.standardizer,
• chemaxon.standardizer.actions,
• chemaxon.standardizer.advancedactions,
• chemaxon.standardizer.concurrent,
• chemaxon.standardizer.configuration,
• chemaxon.standardizer.configuration.reader,
• chemaxon.standardizer.runner,
• chemaxon.struc,
• chemaxon.struc.graphics,
• chemaxon.struc.prop,
• chemaxon.struc.sgroup,
• chemaxon.util,
• chemaxon.util.concurrent.marvin,
• chemaxon.util.iterator,
• com.chemaxon.apidiscovery,
• com.chemaxon.apidiscovery.annotations,
• com.chemaxon.apidiscovery.interfaces,
• com.chemaxon.apidiscovery.util,
• com.chemaxon.calculations.common,
• com.chemaxon.calculations.elemanal,
• com.chemaxon.calculations.io,
• com.chemaxon.calculations.solubility,
• com.chemaxon.calculations.stereoanal,
• com.chemaxon.calculations.stereoanal.filters,
• com.chemaxon.calculations.stereoanal.filters.atrop,
• com.chemaxon.calculations.stereoanal.filters.axial,
• com.chemaxon.calculations.stereoanal.filters.cistrans,
• com.chemaxon.calculations.stereoanal.filters.tetrahedral,
• com.chemaxon.calculations.stereoanal.stereocenters,
• com.chemaxon.calculations.stereoisomers,
• com.chemaxon.calculations.util,
• com.chemaxon.clustering.common,
• com.chemaxon.clustering.framework,
• com.chemaxon.clustering.singlelinkage,
• com.chemaxon.clustering.sphex,
• com.chemaxon.clustering.util,
• com.chemaxon.clustering.wards,
• com.chemaxon.common.annotations,
• com.chemaxon.descriptors.alignment,
• com.chemaxon.descriptors.common,
• com.chemaxon.descriptors.db,
• com.chemaxon.descriptors.fingerprints.cfp,
• com.chemaxon.descriptors.fingerprints.ecfp,
• com.chemaxon.descriptors.fingerprints.maccs,
• com.chemaxon.descriptors.fingerprints.pf2d,
• com.chemaxon.descriptors.metrics,
• com.chemaxon.descriptors.vectors.binary,
• com.chemaxon.descriptors.vectors.floats,
• com.chemaxon.mapper,
• com.chemaxon.overlap.io,
• com.chemaxon.search,
• com.chemaxon.search.mcs,
• com.chemaxon.search.mcs.buildup,
• com.chemaxon.search.mcs.maxclique,
• com.chemaxon.search.mcs.upperbound,
• com.chemaxon.search.transformation,
• com.chemaxon.search.transformation.transformers,
• com.chemaxon.version

Class Hierarchy

• java.lang.Object
  • chemaxon.struc.AbstractAtropStereoDescriptor<T> (implements chemaxon.struc.CIPStereoDescriptorIface)
    • chemaxon.struc.AtropStereoDescriptor
  • chemaxon.struc.AbstractAxialStereoDescriptor<T> (implements chemaxon.struc.CIPStereoDescriptorIface)
    • chemaxon.struc.AxialStereoDescriptor
  • javax.swing.AbstractCellEditor (implements javax.swing.CellEditor, java.io.Serializable)
    • chemaxon.marvin.beans.MViewEditor (implements javax.swing.table.TableCellEditor)
  • chemaxon.struc.AbstractCisTransStereoDescriptor<T> (implements chemaxon.struc.CIPStereoDescriptorIface)
    • chemaxon.struc.CisTransStereoDescriptor
  • chemaxon.marvin.io.formats.AbstractMRecordReader (implements chemaxon.marvin.io.MRecordReader)
  • com.chemaxon.descriptors.alignment.AbstractShapeComparator<T> (implements com.chemaxon.descriptors.alignment.ShapeComparator<T>)
  • com.chemaxon.descriptors.alignment.AbstractShapeGenerator<D,P> (implements com.chemaxon.descriptors.common.DescriptorGenerator<B>)
  • com.chemaxon.descriptors.alignment.AbstractShapeGeneratorParameter (implements com.chemaxon.descriptors.common.DescriptorParameters)
  • chemaxon.standardizer.AbstractStandardizerAction (implements java.lang.Cloneable, chemaxon.license.Licensable, java.beans.PropertyChangeListener, chemaxon.standardizer.StandardizerAction)
    • chemaxon.standardizer.actions.AbsoluteStereoAction
    • chemaxon.standardizer.actions.AbstractSgroupAction
      • chemaxon.standardizer.actions.ContractSgroupsAction
      • chemaxon.standardizer.actions.ExpandSgroupsAction
      • chemaxon.standardizer.actions.UngroupSgroupsAction
    • chemaxon.standardizer.actions.AddExplicitHydrogensAction
    • chemaxon.standardizer.actions.AliasToAtomAction
    • chemaxon.standardizer.actions.AliasToGroupAction
    • chemaxon.standardizer.actions.AromatizeAction
    • chemaxon.standardizer.advancedactions.Clean2DAction
    • chemaxon.standardizer.advancedactions.Clean3DAction
    • chemaxon.standardizer.actions.ClearIsotopesAction
    • chemaxon.standardizer.actions.ClearStereoAction
    • chemaxon.standardizer.actions.ConvertDoubleBondsAction
    • chemaxon.standardizer.actions.ConvertPiMetalBondsAction
    • chemaxon.standardizer.actions.ConvertToEnhancedStereoAction
    • chemaxon.standardizer.advancedactions.CreateGroupAction
    • chemaxon.standardizer.actions.DearomatizeAction
    • chemaxon.standardizer.actions.DisconnectMetalAtomsAction
    • chemaxon.standardizer.actions.ExpandAction
    • chemaxon.standardizer.actions.MapAction
    • chemaxon.standardizer.actions.MapReactionAction
    • chemaxon.standardizer.actions.MesomerizeAction
    • chemaxon.standardizer.actions.NeutralizeAction
    • chemaxon.standardizer.actions.RemoveAbsoluteStereoAction
    • chemaxon.standardizer.actions.RemoveAtomValuesAction
    • chemaxon.standardizer.actions.RemoveAttachedDataAction
    • chemaxon.standardizer.actions.RemoveExplicitHydrogensAction
    • chemaxon.standardizer.actions.RemoveFragmentAction
    • chemaxon.standardizer.actions.RemoveRGroupDefinitionsAction
    • chemaxon.standardizer.advancedactions.RemoveSolventsAction
    • chemaxon.standardizer.actions.RemoveStereoCareBoxAction
    • chemaxon.standardizer.actions.ReplaceAtomsAction
    • chemaxon.standardizer.actions.SetAbsoluteStereoAction
    • chemaxon.standardizer.actions.SetHydrogenIsotopeSymbolAction
    • chemaxon.standardizer.advancedactions.StripSaltsAction
    • chemaxon.standardizer.actions.TautomerizeAction
    • chemaxon.standardizer.advancedactions.TransformAction
    • chemaxon.standardizer.actions.UnmapAction
    • chemaxon.standardizer.actions.WedgeCleanAction
  • com.chemaxon.calculations.stereoanal.filters.AbstractStereoFilter<T>
    • com.chemaxon.calculations.stereoanal.filters.atrop.AtropFilter
    • com.chemaxon.calculations.stereoanal.filters.axial.AxialFilter
    • com.chemaxon.calculations.stereoanal.filters.cistrans.CisDoubleBondFilter
    • com.chemaxon.calculations.stereoanal.filters.cistrans.CisTransDoubleBondFilter
    • com.chemaxon.calculations.stereoanal.filters.HasAttachedDataFilter
    • com.chemaxon.calculations.stereoanal.filters.atrop.KnownAtropFilter
    • com.chemaxon.calculations.stereoanal.filters.axial.KnownAxialFilter
    • com.chemaxon.calculations.stereoanal.filters.cistrans.KnownDoubleBondFilter
    • com.chemaxon.calculations.stereoanal.filters.tetrahedral.KnownResolvedTetrahedralFilter
    • com.chemaxon.calculations.stereoanal.filters.tetrahedral.RacemicTetrahedralFilter
    • com.chemaxon.calculations.stereoanal.filters.tetrahedral.TetrahedralFilter
    • com.chemaxon.calculations.stereoanal.filters.cistrans.TransDoubleBondFilter
    • com.chemaxon.calculations.stereoanal.filters.atrop.UnknownAtropFilter
    • com.chemaxon.calculations.stereoanal.filters.axial.UnknownAxialFilter
    • com.chemaxon.calculations.stereoanal.filters.tetrahedral.UnknownResolvedTetrahedralFilter
    • com.chemaxon.calculations.stereoanal.filters.tetrahedral.UnresolvedTetrahedralFilter
  • chemaxon.checkers.AbstractStructureChecker (implements java.lang.Cloneable, chemaxon.license.Licensable, java.beans.PropertyChangeListener, chemaxon.checkers.StructureChecker)
    • chemaxon.checkers.AbbreviatedGroupChecker
    • chemaxon.checkers.AbsentChiralFlagChecker
    • chemaxon.checkers.AbsoluteStereoConfigurationChecker
    • chemaxon.checkers.AromaticityErrorChecker
    • chemaxon.checkers.AtropisomerChecker
    • chemaxon.checkers.AttachedDataChecker
    • chemaxon.checkers.BondAngleChecker
    • chemaxon.checkers.BondLengthChecker
    • chemaxon.checkers.BracketsChecker
    • chemaxon.checkers.ChiralFlagChecker
    • chemaxon.checkers.ChiralFlagErrorChecker
    • chemaxon.checkers.CircularRGroupReferenceChecker
    • chemaxon.checkers.ComponentChecker<E>
      • chemaxon.checkers.AtomChecker
        • chemaxon.checkers.AliasChecker
        • chemaxon.checkers.AtomMapChecker
        • chemaxon.checkers.AtomQueryPropertyChecker
        • chemaxon.checkers.AtomTypeChecker
          • chemaxon.checkers.RareElementChecker
        • chemaxon.checkers.AtomValueChecker
        • chemaxon.checkers.ExplicitLonePairChecker
        • chemaxon.checkers.IsotopeChecker
        • chemaxon.checkers.MissingAtomMapChecker
        • chemaxon.checkers.MultiCenterChecker
        • chemaxon.checkers.OverlappingAtomsChecker
        • chemaxon.checkers.PseudoAtomChecker
        • chemaxon.checkers.QueryAtomChecker
        • chemaxon.checkers.RacemateChecker
        • chemaxon.checkers.RadicalChecker
        • chemaxon.checkers.StarAtomChecker
        • chemaxon.checkers.StereoInversionRetentionMarkChecker
        • chemaxon.checkers.ThreeDimensionChecker
        • chemaxon.checkers.ValencePropertyChecker
      • chemaxon.checkers.BondChecker
        • chemaxon.checkers.CrossedDoubleBondChecker
        • chemaxon.checkers.OverlappingBondsChecker
        • chemaxon.checkers.QueryBondChecker
        • chemaxon.checkers.ReactingCenterBondMarkChecker
        • chemaxon.checkers.StraightDoubleBondChecker
    • chemaxon.checkers.CoordinationSystemErrorChecker
    • chemaxon.checkers.CovalentCounterionChecker
    • chemaxon.checkers.EmptyStructureChecker
    • chemaxon.checkers.ExplicitHydrogenChecker
    • chemaxon.checkers.ExternalStructureChecker
    • chemaxon.checkers.EZDoubleBondChecker
    • chemaxon.checkers.IncorrectTetrahedralStereoChecker
    • chemaxon.checkers.MetalloceneErrorChecker
    • chemaxon.checkers.MissingRGroupChecker
    • chemaxon.checkers.MoleculeChargeChecker
    • chemaxon.checkers.MultiComponentChecker
    • chemaxon.checkers.MultipleStereocenterChecker
    • chemaxon.checkers.NonStandardWedgeSchemeChecker
    • chemaxon.checkers.NonStereoWedgeBondChecker
    • chemaxon.checkers.OCRErrorChecker
    • chemaxon.checkers.RatomChecker
    • chemaxon.checkers.ReactionChecker
      • chemaxon.checkers.ReactionMapErrorChecker
    • chemaxon.checkers.RelativeStereoChecker
    • chemaxon.checkers.RgroupAttachmentErrorChecker
    • chemaxon.checkers.RgroupBridgeRatomChecker
    • chemaxon.checkers.RingStrainErrorChecker
    • chemaxon.checkers.SolventChecker
    • chemaxon.checkers.StereoCareBoxChecker
    • chemaxon.checkers.SubstructureChecker
    • chemaxon.checkers.UnbalancedReactionChecker
    • chemaxon.checkers.UnusedRGroupChecker
    • chemaxon.checkers.ValenceErrorChecker
    • chemaxon.checkers.WedgeErrorChecker
    • chemaxon.checkers.WigglyBondChecker
    • chemaxon.checkers.WigglyDoubleBondChecker
  • chemaxon.fixers.AbstractStructureFixer (implements chemaxon.fixers.StructureFixer)
    • chemaxon.fixers.AbsentChiralFlagFixer
    • chemaxon.fixers.AbsoluteStereoFixer
    • chemaxon.fixers.AddChiralFlagFixer
    • chemaxon.fixers.BondAngleFixer
    • chemaxon.fixers.BondLengthFixer
    • chemaxon.fixers.CleanFixer
    • chemaxon.fixers.ClearWedgeFixer
    • chemaxon.fixers.ContractGroupFixer
    • chemaxon.fixers.ConvertAliasToGroupFixer
    • chemaxon.fixers.ConvertPseudoToGroupFixer
    • chemaxon.fixers.ConvertToAtomFixer
    • chemaxon.fixers.ConvertToCarbonFixer
    • chemaxon.fixers.ConvertToCrossedDoubleBondFixer
    • chemaxon.fixers.ConvertToElementalFormFixer
    • chemaxon.fixers.ConvertToIonicFormFixer
    • chemaxon.fixers.ConvertToPlainDoubleBondFixer
    • chemaxon.fixers.ConvertToSingleBondFixer
    • chemaxon.fixers.ConvertToWigglyDoubleBondFixer
    • chemaxon.fixers.CrossedDoubleBondFixer
    • chemaxon.fixers.DearomatizeFixer
    • chemaxon.fixers.DistanceBasedMetalloceneFixer
    • chemaxon.fixers.ExpandGroupFixer
    • chemaxon.fixers.ExplicitHydrogenFixer
    • chemaxon.fixers.FlipWedgeBondFixer
    • chemaxon.fixers.IsotopeFixer
    • chemaxon.fixers.MapMoleculeFixer
    • chemaxon.fixers.MapReactionFixer
    • chemaxon.fixers.MetalloceneFixer
    • chemaxon.fixers.NeutralizeChargeFixer
    • chemaxon.fixers.PartialCleanFixer
    • chemaxon.fixers.RearomatizeFixer
    • chemaxon.fixers.RearrangeWedgesFixer
    • chemaxon.fixers.RemoveAliasFixer
    • chemaxon.fixers.RemoveAtomFixer
    • chemaxon.fixers.RemoveAtomMapFixer
    • chemaxon.fixers.RemoveAtomQueryPropertyFixer
    • chemaxon.fixers.RemoveAtomValueFixer
    • chemaxon.fixers.RemoveAttachedDataFixer
    • chemaxon.fixers.RemoveBondFixer
    • chemaxon.fixers.RemoveBracketsFixer
    • chemaxon.fixers.RemoveChiralFlagFixer
    • chemaxon.fixers.RemoveExplicitHydrogenFixer
    • chemaxon.fixers.RemoveInvalidChiralFlagFixer
    • chemaxon.fixers.RemoveRadicalFixer
    • chemaxon.fixers.RemoveReactingCenterBondMarkFixer
    • chemaxon.fixers.RemoveStereoCareBoxFixer
    • chemaxon.fixers.RemoveStereoInversionRetentionMarkFixer
    • chemaxon.fixers.RemoveUnreferencedRgroupDefinitionsFixer
    • chemaxon.fixers.RemoveValencePropertyFixer
    • chemaxon.fixers.RemoveZCoordinateFixer
    • chemaxon.fixers.RgroupAttachmentFixer
    • chemaxon.fixers.SubstructureFixer
    • chemaxon.fixers.UngroupFixer
    • chemaxon.fixers.ValenceFixer
    • chemaxon.fixers.WedgeCleanFixer
    • chemaxon.fixers.WigglyDoubleBondFixer
  • chemaxon.struc.AbstractTetrahedralStereoDescriptor<T> (implements chemaxon.struc.CIPStereoDescriptorIface)
    • chemaxon.struc.TetrahedralStereoDescriptor
  • chemaxon.checkers.runner.configuration.reader.ActionStringBasedConfigurationReader (implements chemaxon.checkers.runner.configuration.reader.ConfigurationReader)
  • chemaxon.marvin.alignment.Alignment
  • chemaxon.marvin.alignment.AlignmentMolecule
  • chemaxon.marvin.alignment.AlignmentMoleculeFactory
  • chemaxon.marvin.alignment.AlignOnPairedAtoms
  • chemaxon.marvin.alignment.AlignRigidEasy (implements chemaxon.license.Licensable)
  • chemaxon.reaction.AtomIdentifier (implements java.lang.Comparable<T>)
  • chemaxon.marvin.space.AtomProperty
  • chemaxon.struc.AtomProperty
  • chemaxon.marvin.space.AtomProperty.MoleculeAtomProperty (implements chemaxon.struc.MoleculeIterators.AtomPropertyInterface)
  • chemaxon.marvin.space.AtomProperty.SmoleculeAtomProperty (implements chemaxon.struc.MoleculeIterators.AtomPropertyInterface)
  • com.chemaxon.calculations.stereoanal.stereocenters.AtomSelection
  • chemaxon.marvin.alignment.AtropIsomerDetector (implements chemaxon.license.Licensable)
  • com.chemaxon.calculations.stereoanal.stereocenters.AtropStereoCenter (implements com.chemaxon.calculations.stereoanal.stereocenters.StereoCenter)
  • com.chemaxon.calculations.stereoanal.stereocenters.AttachedData
  • com.chemaxon.mapper.AutoMapper (implements com.chemaxon.mapper.Mapper<T>)
  • com.chemaxon.mapper.AutoMapper.Options
  • com.chemaxon.calculations.stereoanal.stereocenters.AxialStereoCenter (implements com.chemaxon.calculations.stereoanal.stereocenters.StereoCenter)
  • com.chemaxon.descriptors.alignment.BaseShapeComparatorParameter (implements java.io.Serializable)
  • chemaxon.checkers.runner.BasicCheckerRunner (implements chemaxon.checkers.runner.CheckerRunner)
    • chemaxon.checkers.runner.AdvancedCheckerRunner
    • chemaxon.checkers.runner.SketchCheckerRunner
  • chemaxon.standardizer.runner.BasicStandardizerRunner (implements chemaxon.standardizer.runner.StandardizerActionRunner)
  • com.chemaxon.clustering.framework.BemisMurckoClustering
  • com.chemaxon.descriptors.metrics.BinaryVectorComparator.Util
  • com.chemaxon.descriptors.metrics.BinaryVectorMetricFactory.ToLinenote<C> (implements com.google.common.base.Function<F,T>)
  • com.chemaxon.descriptors.common.BinaryVectors
  • chemaxon.marvin.alignment.atrop.BondInfo
  • chemaxon.core.util.BondTable (implements java.lang.Cloneable, java.io.Serializable)
  • chemaxon.marvin.space.BoundingBox
  • com.chemaxon.descriptors.vectors.binary.BvParameters (implements com.chemaxon.descriptors.common.DescriptorParameters, java.io.Serializable)
  • com.chemaxon.descriptors.vectors.binary.BvParameters.Builder (implements com.chemaxon.apidiscovery.interfaces.ParameterBuilder<T>)
  • chemaxon.jchem.db.cache.CacheRegistrationBase
    • chemaxon.jchem.db.CacheRegistrationUtil
  • chemaxon.marvin.plugin.CalculatorPlugin (implements chemaxon.license.Licensable)
    • chemaxon.marvin.calculations.AlignmentPlugin
    • chemaxon.marvin.calculations.ConformerPlugin
    • chemaxon.marvin.calculations.ElementalAnalyserPlugin
    • chemaxon.marvin.calculations.GeometryPlugin
    • chemaxon.marvin.calculations.IonChargePlugin
    • chemaxon.marvin.calculations.IsoelectricPointPlugin
    • chemaxon.marvin.calculations.IUPACNamingPlugin
    • chemaxon.marvin.calculations.logDPlugin
    • chemaxon.marvin.calculations.logPPlugin
    • chemaxon.marvin.calculations.MajorMicrospeciesAccessorPlugin
      • chemaxon.marvin.calculations.ChargePlugin
      • chemaxon.marvin.calculations.HBDAPlugin
      • chemaxon.marvin.calculations.HuckelAnalysisPlugin
      • chemaxon.marvin.calculations.MSAPlugin
      • chemaxon.marvin.calculations.OrbitalElectronegativityPlugin
      • chemaxon.marvin.calculations.PolarizabilityPlugin
      • chemaxon.marvin.calculations.TPSAPlugin
    • chemaxon.marvin.calculations.MajorMicrospeciesPlugin
    • chemaxon.marvin.calculations.MarkushEnumerationPlugin
    • chemaxon.marvin.calculations.MolecularDynamicsPlugin
    • chemaxon.marvin.calculations.pKaPlugin
    • chemaxon.marvin.calculations.RefractivityPlugin
    • chemaxon.marvin.calculations.ResonancePlugin
    • chemaxon.marvin.calculations.StereoisomerPlugin
    • chemaxon.marvin.calculations.StructuralFrameworksPlugin
    • chemaxon.marvin.calculations.TautomerizationPlugin
    • chemaxon.marvin.calculations.TopologyAnalyserPlugin
  • chemaxon.marvin.plugin.CalculatorPlugin.HydrogenData
  • chemaxon.marvin.plugin.CalculatorPluginDisplay
  • chemaxon.marvin.plugin.CalculatorPluginOutput (implements chemaxon.marvin.plugin.CalculatorResultAccess)
  • chemaxon.marvin.space.CellOrComponentId
  • com.chemaxon.descriptors.fingerprints.cfp.CfpParameters (implements com.chemaxon.descriptors.common.DescriptorParameters)
  • com.chemaxon.descriptors.fingerprints.cfp.CfpParameters.Builder (implements com.chemaxon.apidiscovery.interfaces.ParameterBuilder<T>)
  • chemaxon.standardizer.Changes
  • chemaxon.core.ChemConst
    • chemaxon.struc.PeriodicSystem
  • chemaxon.calculations.cip.CIPStereoCalculator
  • chemaxon.core.calculations.stereo.CIPStereoRecognizer
  • com.chemaxon.calculations.stereoanal.stereocenters.CisTransStereoCenter (implements com.chemaxon.calculations.stereoanal.stereocenters.StereoCenter)
  • chemaxon.calculations.clean.Cleaner
  • chemaxon.marvin.util.CleanUtil (implements chemaxon.struc.HybridizationStateConsts)
  • chemaxon.marvin.modules.datatransfer.ClipboardHandler
  • com.chemaxon.calculations.io.CloseableIterators
  • com.chemaxon.calculations.util.CmdlineUtils
  • chemaxon.marvin.util.codeassist.CodeAssistFactory
  • chemaxon.marvin.util.codeassist.CodeAssistFactory.CodeAssistConfiguration
  • chemaxon.marvin.util.ColorGenerator
  • chemaxon.clustering.Common
    • chemaxon.clustering.Compare
    • chemaxon.clustering.NearestNeighbors
      • chemaxon.clustering.JarvisPatrick
    • chemaxon.clustering.Ward
  • java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    • java.awt.Container
      • javax.swing.JComponent (implements java.io.Serializable)
        • javax.swing.JPanel (implements javax.accessibility.Accessible)
          • chemaxon.marvin.space.GraphicScene (implements chemaxon.marvin.util.CallbackIface, javax.media.opengl.GLEventListener)
          • chemaxon.marvin.beans.MolRenderer (implements javax.swing.table.TableCellRenderer)
          • chemaxon.marvin.plugin.gui.ParameterPanel (implements chemaxon.marvin.plugin.ParameterPanelHandler)
        • javax.swing.JRootPane (implements javax.accessibility.Accessible)
          • chemaxon.marvin.beans.MarvinPane (implements java.awt.event.ComponentListener, java.beans.PropertyChangeListener)
            • chemaxon.marvin.beans.MSketchPane
            • chemaxon.marvin.beans.MViewPane
              • chemaxon.marvin.beans.MViewRenderer (implements javax.swing.table.TableCellRenderer)
      • java.awt.Window (implements javax.accessibility.Accessible)
        • java.awt.Dialog
          • javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • chemaxon.marvin.uif.util.swing.AbstractDialog
              • chemaxon.marvin.uif.dialog.LicenseDialog
            • chemaxon.marvin.plugin.gui.OptionsPane (implements java.awt.event.ActionListener, java.awt.event.WindowListener)
  • chemaxon.marvin.space.ComponentElement
  • chemaxon.reaction.ConcurrentReactorProcessor
  • chemaxon.standardizer.ConcurrentStandardizerProcessor
  • chemaxon.formats.documents.jchemoffice.ConditionRule
  • chemaxon.marvin.space.monitor.Control
    • chemaxon.marvin.space.monitor.DihedralControl
    • chemaxon.marvin.space.monitor.GlobalLocationControl
    • chemaxon.marvin.space.monitor.GlobalOrientationControl
    • chemaxon.marvin.space.monitor.LocalLocationControl
    • chemaxon.marvin.space.monitor.LocalOrientationControl
    • chemaxon.marvin.space.monitor.ResizeControl
  • chemaxon.checkers.result.ConvertConstants
  • com.chemaxon.apidiscovery.CreatorWrapper<T>
  • chemaxon.struc.CTransform3D (implements java.lang.Cloneable, java.io.Externalizable)
  • chemaxon.jchem.db.DatabaseConstants
  • chemaxon.jchem.db.DatabaseProperties (implements chemaxon.jchem.db.TableTypeConstants)
  • chemaxon.util.DatabaseTools
  • chemaxon.sss.search.Decomposition
  • chemaxon.checkers.result.DefaultStructureCheckerResult (implements chemaxon.checkers.result.StructureCheckerResult)
    • chemaxon.checkers.result.AromaticityCheckerResult
    • chemaxon.checkers.result.AtomQueryPropertyCheckerResult
    • chemaxon.checkers.result.BondAngleCheckerResult
    • chemaxon.checkers.result.BondLengthCheckerResult
    • chemaxon.checkers.result.DefaultExternalStructureCheckerResult (implements chemaxon.checkers.result.ExternalStructureCheckerResult)
    • chemaxon.checkers.result.ExplicitHydrogenResult
    • chemaxon.checkers.result.MetalloceneCheckerResult
    • chemaxon.checkers.result.ReactionCheckerResult
    • chemaxon.checkers.result.RgroupCheckerResult
    • chemaxon.checkers.result.SgroupCheckerResult
    • chemaxon.checkers.result.SubstructureCheckerResult
  • chemaxon.descriptors.DescriptorGenerator
  • chemaxon.marvin.alignment.DihedralRotator
  • chemaxon.marvin.alignment.atrop.DihedralScanResult
  • chemaxon.marvin.alignment.atrop.DihedralScanStep
  • chemaxon.calculations.dipole.DipoleCalculator.Builder (implements chemaxon.calculator.CalculatorBuilder<T>)
  • chemaxon.calculations.dipole.DipoleResult
  • com.chemaxon.apidiscovery.Discovery
  • chemaxon.naming.document.annotate.DocumentAnnotator (implements java.lang.AutoCloseable, chemaxon.marvin.io.formats.MoleculeImporterIface)
  • chemaxon.naming.document.annotate.DocumentAnnotator.ProgressInfo
  • chemaxon.naming.document.annotate.DocumentAnnotatorOptions
  • chemaxon.naming.document.annotate.DocumentAnnotatorOptions.Builder
  • chemaxon.formats.documents.jchemoffice.DocumentHandlerFactory
  • chemaxon.marvin.sketch.swing.modules.documentstyle.DocumentStyleAPI
  • chemaxon.naming.document.DocumentToStructure
  • chemaxon.util.DotfileUtil
  • chemaxon.struc.DPoint3 (implements java.lang.Cloneable, java.io.Externalizable)
  • chemaxon.descriptors.ECFPFeature
  • chemaxon.descriptors.ECFPFeatureLookup
  • com.chemaxon.descriptors.fingerprints.ecfp.EcfpParameters (implements com.chemaxon.descriptors.common.DescriptorParameters)
  • com.chemaxon.descriptors.fingerprints.ecfp.EcfpParameters.Builder (implements com.chemaxon.apidiscovery.interfaces.ParameterBuilder<T>)
  • chemaxon.calculations.ElementalAnalyser
  • com.chemaxon.calculations.stereoanal.stereocenters.EnhancedStereo
  • com.chemaxon.calculations.stereoanal.stereocenters.EnhancedStereoGroup
  • chemaxon.util.ErrorHandler
    • chemaxon.util.ConnectionHandler
    • chemaxon.jchem.db.JChemSearch (implements chemaxon.license.Licensable, chemaxon.sss.SearchConstants, chemaxon.jchem.db.TableTypeConstants)
    • chemaxon.util.MolHandlerBase
      • chemaxon.util.MolHandler
    • chemaxon.jchem.db.UpdateHandler (implements chemaxon.jchem.db.TableTypeConstants)
  • com.chemaxon.calculations.stereoanal.ErrorReport
  • chemaxon.jep.Evaluator (implements java.io.Serializable)
  • chemaxon.jchem.db.Exporter (implements chemaxon.jchem.db.Transfer)
  • com.chemaxon.search.mcs.upperbound.FastUpperBoundCalculator (implements com.chemaxon.search.mcs.upperbound.UpperBoundCalculator)
  • chemaxon.fixers.FixerPriorityComparator (implements java.util.Comparator<T>)
  • com.chemaxon.descriptors.metrics.FloatVectorComparator.Util
  • chemaxon.sss.formula.FormulaSearch
  • com.chemaxon.descriptors.vectors.floats.FvParameters (implements com.chemaxon.descriptors.common.DescriptorParameters, java.io.Serializable)
  • com.chemaxon.descriptors.vectors.floats.FvParameters.Builder (implements com.chemaxon.apidiscovery.interfaces.ParameterBuilder<T>)
  • chemaxon.formats.GeneralExportOptions (implements chemaxon.formats.ExportOptions)
    • chemaxon.marvin.io.image.ImageExporter (implements chemaxon.formats.BinaryExporter<T>)
      • chemaxon.marvin.io.formats.vectgraphics.EmfExporter
      • chemaxon.marvin.io.image.exporter.JpegExporter
      • chemaxon.marvin.io.image.exporter.MsbmpExporter
      • chemaxon.marvin.io.formats.vectgraphics.PdfExporter
      • chemaxon.marvin.io.image.exporter.PngExporter
      • chemaxon.marvin.io.formats.vectgraphics.SvgExporter
  • chemaxon.formats.GeneralExportOptions.Builder<T>
    • chemaxon.marvin.io.image.ImageExporter.Builder<T>
      • chemaxon.marvin.io.formats.vectgraphics.EmfExporter.Builder<T>
      • chemaxon.marvin.io.image.exporter.JpegExporter.Builder<T>
      • chemaxon.marvin.io.image.exporter.MsbmpExporter.Builder<T>
      • chemaxon.marvin.io.formats.vectgraphics.PdfExporter.Builder<T>
      • chemaxon.marvin.io.image.exporter.PngExporter.Builder<T>
      • chemaxon.marvin.io.formats.vectgraphics.SvgExporter.Builder<T>
  • chemaxon.descriptors.GenerateMD
  • chemaxon.formats.documents.jchemoffice.GenericOptions (implements chemaxon.formats.documents.jchemoffice.IGenericOptions)
    • chemaxon.formats.documents.jchemoffice.ConversionOptions (implements chemaxon.formats.documents.jchemoffice.IConversionOptions)
    • chemaxon.formats.documents.jchemoffice.ReportSettings (implements chemaxon.formats.documents.jchemoffice.ISettings)
    • chemaxon.formats.documents.jchemoffice.TemplateWriterOptions (implements chemaxon.formats.documents.jchemoffice.ITemplateWriterOptions)
  • chemaxon.marvin.space.GraphicCell
  • chemaxon.marvin.space.GraphicComponent (implements chemaxon.marvin.space.UsableObject)
    • chemaxon.marvin.space.MacroMoleculeComponent
    • chemaxon.marvin.space.MolecularSurfaceComponent (implements chemaxon.marvin.util.CallbackIface, chemaxon.marvin.space.UsableObject)
    • chemaxon.marvin.space.MoleculeComponent (implements chemaxon.marvin.space.MacroMoleculeComponent.MoleculeVisualizer, chemaxon.struc.MoleculeIterators.MoleculeInterface, chemaxon.marvin.space.UsableObject)
    • chemaxon.marvin.space.monitor.Monitor
      • chemaxon.marvin.space.monitor.Label
      • chemaxon.marvin.space.monitor.MeasurementMonitor
        • chemaxon.marvin.space.monitor.AngleMonitor
        • chemaxon.marvin.space.monitor.DihedralMonitor
        • chemaxon.marvin.space.monitor.DistanceMonitor
      • chemaxon.marvin.space.monitor.PositionMonitor
    • chemaxon.marvin.space.PharmacophoreArrow (implements chemaxon.marvin.space.UsableObject)
    • chemaxon.marvin.space.PharmacophorePoint (implements chemaxon.marvin.space.UsableObject)
    • chemaxon.marvin.space.SurfaceComponent
  • chemaxon.standardizer.advancedactions.GroupDefinition (implements java.lang.Cloneable, java.lang.Comparable<T>)
  • com.chemaxon.descriptors.common.Guarded.EnsureThat
  • com.chemaxon.descriptors.common.Guarded.New
  • chemaxon.sss.screen.HashCode
  • chemaxon.util.HitColoringAndAlignmentOptions (implements java.lang.Cloneable)
  • chemaxon.util.HitDisplayTool (implements chemaxon.license.Licensable, chemaxon.sss.SearchConstants)
  • chemaxon.util.HitDisplayUtil
  • chemaxon.marvin.calculations.HlbPlugin.Builder
  • chemaxon.util.HTMLTools
  • chemaxon.calculations.hydrogenize.Hydrogenize (implements chemaxon.struc.StereoConstants)
  • com.chemaxon.clustering.common.IDBasedAssignerBuilder
  • com.chemaxon.clustering.common.IDBasedClusterBuilder
  • com.chemaxon.clustering.common.IDBasedHierarchicClusterBuidler
  • chemaxon.marvin.io.image.ImageExportParamConstants
  • chemaxon.util.ImageExportUtil
  • java.io.InputStream (implements java.io.Closeable)
    • java.io.FilterInputStream
      • java.io.BufferedInputStream
        • chemaxon.marvin.io.PositionedInputStream
          • chemaxon.formats.MolInputStream
  • com.chemaxon.apidiscovery.InstanceWrapper<T>
  • chemaxon.checkers.InvalidChecker (implements chemaxon.checkers.StructureChecker)
  • chemaxon.standardizer.actions.InvalidStandardizerAction (implements chemaxon.standardizer.StandardizerAction)
  • chemaxon.util.iterator.IteratorFactory
  • chemaxon.util.iterator.IteratorFactory.AtomIterator (implements java.util.Iterator<E>)
  • chemaxon.util.iterator.IteratorFactory.BondIterator (implements java.util.Iterator<E>)
  • chemaxon.util.iterator.IteratorFactory.NeighbourIterator<E> (implements java.util.Iterator<E>)
    • chemaxon.util.iterator.IteratorFactory.AtomNeighbourIterator
    • chemaxon.util.iterator.IteratorFactory.BondNeighbourIterator
  • chemaxon.util.iterator.IteratorFactory.RgComponentIterator (implements java.util.Iterator<E>)
  • chemaxon.util.iterator.IteratorFactory.RxnComponentIterator (implements java.util.Iterator<E>)
  • chemaxon.util.iterator.IteratorFactory.SgroupIterator (implements java.util.Iterator<E>)
  • chemaxon.formats.documents.jchemexcel.JChemExcelAPI
  • chemaxon.jchem.db.JChemSearch.DissimilarityMetrics
  • chemaxon.nfunk.jep.JEP (implements java.io.Serializable)
    • chemaxon.jep.ChemJEP (implements chemaxon.marvin.util.CallbackIface)
  • com.chemaxon.clustering.wards.LanceWilliamsAlgorithm
  • com.chemaxon.clustering.wards.LanceWilliamsMerges
  • com.chemaxon.clustering.wards.LanceWilliamsMerges.AverageLinkage (implements com.chemaxon.clustering.wards.LanceWilliamsMerge)
  • com.chemaxon.clustering.wards.LanceWilliamsMerges.CompleteLinkage (implements com.chemaxon.clustering.wards.LanceWilliamsMerge)
  • com.chemaxon.clustering.wards.LanceWilliamsMerges.SingleLinkage (implements com.chemaxon.clustering.wards.LanceWilliamsMerge)
  • com.chemaxon.clustering.wards.LanceWilliamsMerges.Wards (implements com.chemaxon.clustering.wards.LanceWilliamsMerge)
  • chemaxon.clustering.adapter.LegacyLibraryMcsAdapter
  • chemaxon.clustering.LibraryMCS (implements chemaxon.license.Licensable)
  • chemaxon.clustering.LibraryMCS.ClusterEnumerator
  • chemaxon.license.LicenseManager
  • chemaxon.formats.documents.jchemoffice.Location
  • com.chemaxon.descriptors.fingerprints.maccs.MaccsParameters (implements com.chemaxon.descriptors.common.DescriptorParameters)
  • com.chemaxon.descriptors.fingerprints.maccs.MaccsParameters.Builder (implements com.chemaxon.apidiscovery.interfaces.ParameterBuilder<T>)
  • chemaxon.sss.search.MarkushFeature (implements java.io.Serializable)
  • chemaxon.sss.search.MarkushGenerator
  • chemaxon.marvin.modules.datatransfer.MarvinTransferable (implements chemaxon.marvin.modules.datatransfer.MTransferable)
  • chemaxon.sss.search.MatchCountOptions (implements chemaxon.sss.SearchConstants, java.io.Serializable)
  • com.chemaxon.search.MatchingOptions
    • com.chemaxon.search.mcs.McsSearchOptions
  • com.chemaxon.search.MatchingOptions.Builder
    • com.chemaxon.search.mcs.McsSearchOptions.Builder
  • com.chemaxon.search.mcs.MaxCommonSubstructure (implements chemaxon.license.Licensable)
    • com.chemaxon.search.mcs.buildup.BuildupMcs
    • com.chemaxon.search.mcs.maxclique.MaxCliqueMcs
  • chemaxon.marvin.alignment.MCSAlignment.Factory
  • com.chemaxon.search.mcs.McsSearchResult
  • chemaxon.descriptors.MDGenerator
    • chemaxon.descriptors.BCUTGenerator
    • chemaxon.descriptors.CFGenerator
    • chemaxon.descriptors.ECFPGenerator (implements chemaxon.license.Licensable)
    • chemaxon.descriptors.PFGenerator
    • chemaxon.descriptors.RFGenerator
    • chemaxon.descriptors.ShapeGenerator
  • chemaxon.descriptors.MDHitEvaluator
  • chemaxon.descriptors.MDHypothesisCreator
  • chemaxon.formats.MdlCompressor
  • chemaxon.descriptors.MDMetricOptimizer
  • chemaxon.marvin.io.MDocSource (implements java.io.Closeable, java.lang.Iterable<T>)
    • chemaxon.marvin.io.ArrayMDocSource
    • chemaxon.formats.MolImporter (implements chemaxon.marvin.io.formats.MoleculeImporterIface)
  • chemaxon.marvin.view.MDocStorage
  • chemaxon.struc.MDocument (implements chemaxon.core.structure.DocumentForBuilder, chemaxon.struc.MTransformable, java.io.Serializable)
    • chemaxon.struc.MSelectionDocument
  • chemaxon.struc.MDocument.CheckerMark
  • chemaxon.descriptors.MDParameters
    • chemaxon.descriptors.BCUTParameters
    • chemaxon.descriptors.CDParameters
    • chemaxon.descriptors.CFParameters
    • chemaxon.descriptors.ECFPParameters
    • chemaxon.descriptors.PFParameters
    • chemaxon.descriptors.RFParameters
    • chemaxon.descriptors.SDParameters
      • chemaxon.descriptors.scalars.HBParameters
      • chemaxon.descriptors.scalars.LDParameters
    • chemaxon.descriptors.ShapeParameters
  • chemaxon.descriptors.MDReader
    • chemaxon.descriptors.MDArrayReader
    • chemaxon.descriptors.MDDBReader
    • chemaxon.descriptors.MDFileReader
  • chemaxon.descriptors.MDSet
  • chemaxon.descriptors.MDSetParameters
  • chemaxon.descriptors.MDSimilarity (implements chemaxon.license.Licensable)
  • chemaxon.descriptors.MDSimilarityResultWriter
  • chemaxon.jchem.db.MDTableHandler
  • com.chemaxon.descriptors.db.MDTableReader<D>
    • com.chemaxon.descriptors.fingerprints.cfp.CfpTableReader
    • com.chemaxon.descriptors.fingerprints.ecfp.EcfpTableReader
    • com.chemaxon.descriptors.fingerprints.pf2d.PfTableReader
  • chemaxon.descriptors.MDWriter
    • chemaxon.descriptors.MDDBWriter
    • chemaxon.descriptors.MDFileWriter
  • com.chemaxon.descriptors.metrics.MetricFactory.ToLinenote<C> (implements com.google.common.base.Function<F,T>)
  • chemaxon.descriptors.Metrics
  • chemaxon.marvin.io.MFieldAccessor
  • chemaxon.formats.MFileFormat
  • chemaxon.formats.MFileFormatUtil
  • chemaxon.struc.graphics.MFont (implements java.lang.Cloneable, java.io.Serializable)
  • chemaxon.marvin.alignment.MinMaxDistance
  • chemaxon.marvin.alignment.MMPAlignment
  • chemaxon.marvin.alignment.MMPAlignmentProperties
  • chemaxon.marvin.alignment.MMPAlignmentResult (implements chemaxon.marvin.alignment.AlignmentResult)
  • chemaxon.struc.MObject (implements java.lang.Cloneable, java.io.Serializable)
    • chemaxon.struc.graphics.MChemicalStruct
    • chemaxon.struc.MPoint
      • chemaxon.struc.graphics.MAtomSetPoint
      • chemaxon.struc.graphics.MEFlowBasePoint
      • chemaxon.struc.graphics.MMidPoint
        • chemaxon.struc.graphics.MMidPoint.Sticky
      • chemaxon.struc.graphics.MRectanglePoint
        • chemaxon.struc.graphics.MRectanglePoint.Sticky
    • chemaxon.struc.graphics.MPolyline
      • chemaxon.struc.graphics.MEFlow
      • chemaxon.struc.graphics.MRectangle
        • chemaxon.struc.graphics.MBracket
        • chemaxon.struc.graphics.MEllipse
        • chemaxon.struc.graphics.MRoundedRectangle
        • chemaxon.struc.graphics.MTextBox
  • chemaxon.util.MolAligner
  • chemaxon.struc.MolAtom (implements java.io.Serializable, chemaxon.struc.StereoConstants)
    • chemaxon.struc.sgroup.SgroupAtom
  • chemaxon.struc.MolBond (implements java.io.Serializable, chemaxon.struc.StereoConstants)
    • chemaxon.struc.QueryBond
  • chemaxon.sss.search.MolComparator
  • chemaxon.jep.context.MolContext (implements chemaxon.jep.ChemContext)
    • chemaxon.jep.context.AtomContext
  • chemaxon.formats.MolConverter
  • chemaxon.formats.MolConverter.Builder
    • chemaxon.formats.MolConverter.Options
  • chemaxon.descriptors.MolecularDescriptor (implements java.lang.Cloneable)
    • chemaxon.descriptors.BCUT (implements chemaxon.license.Licensable)
    • chemaxon.descriptors.ChemicalFingerprint
    • chemaxon.descriptors.CustomDescriptor
    • chemaxon.descriptors.ECFP (implements chemaxon.license.Licensable)
    • chemaxon.descriptors.PharmacophoreFingerprint (implements chemaxon.license.Licensable)
    • chemaxon.descriptors.ReactionFingerprint
    • chemaxon.descriptors.ScalarDescriptor
      • chemaxon.descriptors.scalars.HAcc
      • chemaxon.descriptors.scalars.HDon
      • chemaxon.descriptors.scalars.Heavy
      • chemaxon.descriptors.scalars.LogD
      • chemaxon.descriptors.scalars.LogP
      • chemaxon.descriptors.scalars.Mass
      • chemaxon.descriptors.scalars.TPSA
    • chemaxon.descriptors.ShapeDescriptor (implements chemaxon.license.Licensable)
  • com.chemaxon.calculations.elemanal.MolecularFormulas
  • chemaxon.struc.MoleculeGraph (implements chemaxon.struc.Incomplecule, chemaxon.core.structure.MoleculeForBuilder, chemaxon.core.calculations.valencecheck.MoleculeWithValence<AtomReference>, chemaxon.struc.MTransformable, java.io.Serializable, chemaxon.struc.StereoConstants)
    • chemaxon.struc.Molecule (implements chemaxon.struc.MObjectContainer)
      • chemaxon.struc.RgMolecule (implements chemaxon.core.structure.MarkushStructureForBuilder, chemaxon.struc.MObjectContainer, chemaxon.struc.RgMoleculeGraphIface)
      • chemaxon.struc.RxnMolecule (implements chemaxon.struc.MObjectContainer, chemaxon.core.structure.ReactionForBuilder)
    • chemaxon.struc.SelectionMolecule
  • chemaxon.marvin.io.formats.MoleculeImporter (implements chemaxon.marvin.io.formats.MoleculeImporterIface)
  • com.chemaxon.calculations.io.MoleculeIo
  • chemaxon.util.iterator.MoleculeIteratorFactory
  • chemaxon.formats.documents.jchemoffice.MoleculeMap
  • chemaxon.formats.documents.jchemoffice.MoleculeRenderContainer
  • chemaxon.marvin.util.MoleculeUtil
  • chemaxon.formats.MolExporter (implements java.io.Closeable)
  • chemaxon.marvin.io.MolExportModule
    • chemaxon.marvin.io.formats.mdl.MolExport (implements chemaxon.struc.StereoConstants)
  • chemaxon.marvin.io.formats.mdl.MolfileUtil
  • chemaxon.marvin.util.MolFragLoader
  • chemaxon.marvin.util.MolFragLoader.RgroupAttachmentCountFilter (implements chemaxon.util.MolFilter)
  • chemaxon.marvin.io.MolImportModule
    • chemaxon.marvin.io.formats.mdl.MolImport (implements chemaxon.struc.StereoConstants)
  • com.chemaxon.clustering.common.MolInputBuilder
  • chemaxon.util.concurrent.marvin.MolInputProducer (implements chemaxon.util.concurrent.InputProducer<V>)
  • chemaxon.marvin.MolPrinter
  • chemaxon.struc.MProp (implements java.lang.Cloneable, java.io.Serializable)
    • chemaxon.struc.prop.MBooleanProp
    • chemaxon.struc.prop.MCollectionProp
      • chemaxon.struc.prop.MHashProp
      • chemaxon.struc.prop.MListProp
    • chemaxon.struc.MDocument.Prop
    • chemaxon.struc.prop.MDoubleArrayProp
    • chemaxon.struc.prop.MDoubleProp
    • chemaxon.struc.prop.MHCoords3DProp (implements chemaxon.struc.MTransformable)
    • chemaxon.struc.prop.MIntegerArrayProp
    • chemaxon.struc.prop.MIntegerProp
    • chemaxon.struc.prop.MMoleculeProp
    • chemaxon.struc.prop.MObjectProp
    • chemaxon.struc.prop.MStringProp
  • chemaxon.struc.MPropertyContainer (implements java.lang.Cloneable, java.io.Externalizable)
  • chemaxon.marvin.io.MPropHandler
  • chemaxon.marvin.io.MRecord
  • chemaxon.marvin.io.MRecordImporter
  • chemaxon.marvin.io.MRecordReader.Position
  • chemaxon.marvin.beans.MSketch (implements java.io.Externalizable)
  • chemaxon.marvin.space.MSpaceEasy (implements chemaxon.marvin.util.CallbackIface)
  • chemaxon.struc.graphics.MTextAttributes (implements java.io.Externalizable)
  • chemaxon.struc.graphics.MTextDocument (implements java.io.Externalizable)
  • chemaxon.struc.graphics.MTextDocument.Portion
  • chemaxon.struc.graphics.MTextDocument.Section
  • chemaxon.marvin.beans.MView (implements java.io.Externalizable)
  • chemaxon.marvin.beans.MViewParams
  • chemaxon.naming.NameConverters
  • chemaxon.calculations.nmr.NMRCalculator.Builder (implements chemaxon.calculator.CalculatorBuilder<T>)
  • chemaxon.calculations.nmr.io.NMRExporter
  • chemaxon.calculations.nmr.NMRSpectrum (implements chemaxon.calculations.nmr.Spectrum)
  • chemaxon.struc.NoStructure
  • chemaxon.marvin.util.OptionDescriptor
  • com.chemaxon.calculations.io.OrderedElements
  • chemaxon.marvin.alignment.PairwiseAlignment (implements chemaxon.marvin.alignment.PairwiseComparison)
  • chemaxon.marvin.alignment.PairwiseSimilarity3D (implements chemaxon.marvin.alignment.PairwiseComparison)
  • chemaxon.marvin.common.ParameterConstants
    • chemaxon.marvin.sketch.SketchParameterConstants
    • chemaxon.marvin.view.ViewParameterConstants
  • chemaxon.marvin.plugin.gui.ParameterTab
  • com.chemaxon.apidiscovery.ParameterWrapper
  • com.chemaxon.descriptors.fingerprints.pf2d.PfParameters (implements com.chemaxon.descriptors.common.DescriptorParameters)
  • com.chemaxon.descriptors.fingerprints.pf2d.PfParameters.Builder (implements com.chemaxon.apidiscovery.interfaces.ParameterBuilder<T>)
  • chemaxon.marvin.alignment.Pharmacophore3D
  • chemaxon.marvin.plugin.PluginFactory
  • chemaxon.marvin.plugin.PluginFactory.PluginRecord (implements java.lang.Comparable<T>)
  • chemaxon.marvin.plugin.concurrent.PluginWorkUnit (implements chemaxon.util.concurrent.WorkUnit)
    • chemaxon.marvin.plugin.concurrent.DefaultPluginWorkUnit
    • chemaxon.marvin.plugin.concurrent.ReusablePluginWorkUnit
  • chemaxon.pharmacophore.PMap
  • chemaxon.pharmacophore.PMapper (implements chemaxon.license.Licensable)
  • chemaxon.calculator.ProgressableCalculator<T,R> (implements chemaxon.calculator.Calculator<T,R>, chemaxon.license.Licensable)
    • chemaxon.calculations.dipole.DipoleCalculator
    • chemaxon.calculations.nmr.NMRCalculator
  • com.chemaxon.calculations.common.ProgressObservers
  • chemaxon.jchem.file.ProgressWriter
  • chemaxon.formats.documents.jchemoffice.PropertyColoring
  • chemaxon.pharmacophore.PSymbols
  • chemaxon.jep.context.ReactionContext (implements chemaxon.jep.ChemContext)
  • chemaxon.marvin.modules.reaction.ReactionEditUtils
  • chemaxon.reaction.Reactor (implements chemaxon.license.Licensable, java.io.Serializable)
  • chemaxon.formats.recognizer.Recognizer
    • chemaxon.formats.recognizer.AbbrevGroupRecognizer
    • chemaxon.formats.recognizer.PDBRecognizer
    • chemaxon.formats.recognizer.PeptideRecognizer
    • chemaxon.formats.recognizer.SMILESRecognizer
    • chemaxon.formats.recognizer.XYZRecognizer
      • chemaxon.formats.recognizer.CubeRecognizer
  • chemaxon.formats.recognizer.RecognizerList
  • chemaxon.jchem.db.RegenerationChecker
  • chemaxon.jchem.db.RegenerationConstants
  • chemaxon.sss.search.RgDecompResults
  • chemaxon.calculations.Ring (implements chemaxon.license.Licensable)
  • chemaxon.marvin.alignment.RotatableBondDetector
  • chemaxon.sss.search.Search (implements chemaxon.sss.SearchConstants, chemaxon.struc.StereoConstants)
    • chemaxon.sss.search.MolSearch (implements chemaxon.license.Licensable, com.chemaxon.search.SimpleSearcher)
      • chemaxon.sss.search.StandardizedMolSearch
        • chemaxon.sss.search.RGroupDecomposition (implements chemaxon.license.Licensable)
  • chemaxon.sss.search.SearchHit
  • chemaxon.sss.search.SearchOptions (implements java.lang.Cloneable, chemaxon.sss.SearchConstants, java.io.Serializable)
    • chemaxon.sss.search.JChemSearchOptions (implements java.lang.Cloneable, chemaxon.sss.SearchConstants, java.io.Serializable)
    • chemaxon.sss.search.MolSearchOptions (implements java.lang.Cloneable, chemaxon.sss.SearchConstants)
  • chemaxon.marvin.services.ServiceArgument<T>
    • chemaxon.marvin.services.DynamicArgument<CT,RT>
  • chemaxon.marvin.services.ServiceDescriptor
    • chemaxon.marvin.services.httpservice.HTTPServiceDescriptor
    • chemaxon.marvin.services.json.JsonServiceDescriptor
    • chemaxon.marvin.services.localservice.LocalServiceDescriptor
    • chemaxon.marvin.services.soap.SoapServiceDescriptor
    • chemaxon.marvin.services.xmlrpcservice.XMLRPCServiceDescriptor
  • chemaxon.marvin.services.ServiceDescriptorTools
  • chemaxon.marvin.services.ServiceHandler<DT>
  • com.chemaxon.apidiscovery.util.ServiceUtil
  • chemaxon.struc.Sgroup (implements java.io.Serializable)
    • chemaxon.struc.sgroup.DataSgroup
    • chemaxon.struc.sgroup.MulticenterSgroup
    • chemaxon.struc.sgroup.MultipleSgroup (implements chemaxon.struc.sgroup.Expandable)
    • chemaxon.struc.sgroup.RepeatingUnitSgroup
    • chemaxon.struc.sgroup.SuperatomSgroup (implements chemaxon.core.structure.AbbreviationForBuilder<A>, chemaxon.struc.sgroup.Expandable)
  • chemaxon.calculations.nmr.Shift
  • chemaxon.sss.screen.Similarity
  • chemaxon.descriptors.SimilarityCalculator<T>
  • chemaxon.descriptors.SimilarityCalculatorFactory
  • java.beans.SimpleBeanInfo (implements java.beans.BeanInfo)
    • chemaxon.marvin.beans.MarvinPaneBeanInfo
      • chemaxon.marvin.beans.MSketchPaneBeanInfo
      • chemaxon.marvin.beans.MViewPaneBeanInfo
  • com.chemaxon.search.SimpleSearcherFactory
  • com.chemaxon.clustering.singlelinkage.SingleLinkage
  • chemaxon.marvin.io.formats.smiles.SmartsAtomQuerifier (implements chemaxon.marvin.modules.smarts.SmartsAtomTreeParserTreeConstants)
  • com.chemaxon.calculations.solubility.SolubilityCalculator
  • com.chemaxon.calculations.solubility.SolubilityCategories
  • com.chemaxon.calculations.solubility.SolubilityCategories.UndefinedSolubilityCategory (implements com.chemaxon.calculations.solubility.SolubilityCategory)
  • com.chemaxon.clustering.sphex.SphereExclusion
  • chemaxon.standardizer.Standardizer
  • chemaxon.standardizer.StandardizerActionDescriptor (implements java.lang.Cloneable)
  • chemaxon.standardizer.StandardizerActionFactory
  • chemaxon.standardizer.StandardizerActionFactory.Builder
  • chemaxon.standardizer.StandardizerActionFactory.StandardizerClassDescriptor
  • chemaxon.standardizer.configuration.reader.StandardizerActionStringReader (implements chemaxon.standardizer.configuration.reader.StandardizerConfigurationReader)
  • chemaxon.standardizer.configuration.StandardizerConfiguration (implements java.lang.Cloneable)
  • chemaxon.standardizer.concurrent.StandardizerResult
  • chemaxon.standardizer.concurrent.StandardizerRunner
  • chemaxon.standardizer.StandardizerUtil
  • com.chemaxon.overlap.io.StandardizerWrappers
  • chemaxon.standardizer.configuration.reader.StandardizerXMLReader (implements chemaxon.standardizer.configuration.reader.StandardizerConfigurationReader)
  • com.chemaxon.search.mcs.upperbound.StandardUpperBoundCalculator (implements com.chemaxon.search.mcs.upperbound.UpperBoundCalculator)
  • chemaxon.struc.StereoActivePart
  • com.chemaxon.calculations.stereoanal.StereoAnalysis
  • chemaxon.checkers.StereoCheckUtility
  • chemaxon.calculations.stereo.Stereochemistry
  • com.chemaxon.calculations.stereoisomers.StereoisomerSettings
  • chemaxon.sss.screen.StrucFPConfig
  • chemaxon.checkers.StructureCheck
  • chemaxon.checkers.StructureCheckerDescriptor (implements java.lang.Cloneable)
  • chemaxon.checkers.StructureCheckerFactory
  • chemaxon.checkers.StructureCheckerHelper
  • chemaxon.checkers.StructureCheckerUtility
  • chemaxon.checkers.StructureCheckOptions
  • chemaxon.checkers.StructureCheckOptions.ModeConverter (implements com.beust.jcommander.IStringConverter<T>)
  • chemaxon.checkers.StructureCheckOptions.TypeConverter (implements com.beust.jcommander.IStringConverter<T>)
  • chemaxon.fixers.StructureFixerDescriptor (implements java.lang.Cloneable)
  • chemaxon.fixers.StructureFixerFactory
  • chemaxon.jchem.db.StructureTableOptions (implements chemaxon.jchem.db.TableTypeConstants)
  • chemaxon.formats.documents.jchemexcel.StructureToJC4XL
  • chemaxon.marvin.space.SurfaceColoring
  • chemaxon.marvin.util.SwingUtil (implements java.io.Serializable)
  • chemaxon.marvin.view.swing.TableOptions
  • chemaxon.jchem.db.TableStatistics
  • chemaxon.marvin.view.swing.TableSupport
  • com.chemaxon.calculations.stereoanal.stereocenters.TetrahedralStereoCenter (implements com.chemaxon.calculations.stereoanal.stereocenters.StereoCenter)
  • java.lang.Thread (implements java.lang.Runnable)
    • chemaxon.jchem.db.Importer (implements chemaxon.jchem.db.Transfer)
    • chemaxon.util.UploadThread
  • java.lang.Throwable (implements java.io.Serializable)
    • java.lang.Exception
      • chemaxon.jchem.db.DatabaseSearchException
        • chemaxon.jchem.db.MaxSearchFrequencyExceededException
      • java.util.concurrent.ExecutionException
        • chemaxon.marvin.plugin.concurrent.PluginExecutionException
      • java.io.IOException
        • chemaxon.marvin.io.MolExportException
        • chemaxon.formats.MolFormatException
          • chemaxon.naming.NameFormatException
            • chemaxon.naming.NameFormatException.FilteredCase
            • chemaxon.naming.NamePrefixException
      • chemaxon.descriptors.MDGeneratorException
      • chemaxon.marvin.view.MDocStorage.CancellationException
      • chemaxon.marvin.view.MDocStorage.RecordUnavailableException
      • chemaxon.descriptors.MDReaderException
      • chemaxon.descriptors.MDWriterException
      • chemaxon.marvin.io.MRecordParseException
      • chemaxon.marvin.plugin.PluginException
      • chemaxon.reaction.ReactionException
      • chemaxon.jchem.db.RecalculationException
      • java.lang.RuntimeException
        • java.lang.IllegalArgumentException
          • com.chemaxon.calculations.io.OrderedInputProcessingException
        • chemaxon.descriptors.MDParametersException
        • com.chemaxon.descriptors.alignment.ShapeComparatorException
        • com.chemaxon.descriptors.alignment.ShapeGeneratorException
      • chemaxon.sss.search.SearchException
      • chemaxon.marvin.services.ServiceException
      • chemaxon.jchem.db.TransferException
      • chemaxon.jchem.db.UpdateHandlerException
  • chemaxon.calculations.TopologyAnalyser (implements chemaxon.license.Licensable)
  • chemaxon.marvin.modules.datatransfer.TransferableDescriptor (implements java.lang.Comparable<T>)
  • com.chemaxon.search.transformation.TransformerFactory
  • com.chemaxon.descriptors.metrics.TverskyParameters (implements com.chemaxon.descriptors.metrics.BinaryVectorComparator, com.chemaxon.descriptors.metrics.MetricMetadata, java.io.Serializable)
  • com.chemaxon.descriptors.metrics.TverskyParameters.Builder (implements com.chemaxon.apidiscovery.interfaces.ParameterBuilder<T>)
  • com.chemaxon.clustering.common.UnitPathAssigner
  • com.google.common.collect.UnmodifiableIterator<E> (implements java.util.Iterator<E>)
    • com.google.common.collect.AbstractIterator<T>
      • com.chemaxon.calculations.io.CloseableAbstractIterator<T> (implements com.chemaxon.calculations.io.CloseableIterator<T>)
        • com.chemaxon.calculations.io.MemoizingIterator<E,R> (implements com.chemaxon.calculations.io.MemoizedSparseCollection<T>)
          • com.chemaxon.calculations.io.SmilesMemoizingMoleculeIterator
      • com.chemaxon.calculations.stereoisomers.StereoisomerEnumeration
  • chemaxon.jchem.db.UpdateHandler.RowData (implements java.io.Serializable)
  • chemaxon.jchem.db.Updater
  • chemaxon.jchem.db.Updater.UpdateInfo (implements java.io.Serializable)
  • chemaxon.marvin.common.UserSettings
  • com.chemaxon.clustering.util.Util
  • com.chemaxon.clustering.util.Util.StringScatterPlot
  • chemaxon.core.calculations.valencecheck.ValenceCheckOptions (implements java.io.Serializable)
  • chemaxon.core.calculations.valencecheck.ValenceCheckOptions.Builder
  • com.chemaxon.version.VersionInfo
  • chemaxon.formats.documents.jchemexcel.WorkbookHandlerFactory
  • chemaxon.checkers.runner.configuration.reader.XMLBasedConfigurationReader (implements chemaxon.checkers.runner.configuration.reader.ConfigurationReader)

Interface Hierarchy

• chemaxon.marvin.alignment.AlignmentMoleculeFactory.ProgressBarInterface
• chemaxon.marvin.services.AsyncCallback<T>
• java.lang.AutoCloseable
  • java.io.Closeable
    • com.chemaxon.calculations.io.CloseableIterator<T> (also extends java.util.Iterator<E>)
  • com.chemaxon.calculations.common.ProgressObserver (also extends com.chemaxon.calculations.common.CancelObserver)
    • com.chemaxon.calculations.common.SubProgressObserver
• com.chemaxon.descriptors.vectors.binary.BvParameters.ConstructBvGenerator
• chemaxon.marvin.util.CallbackIface
  • chemaxon.jep.ChemContext (also extends java.io.Serializable)
• com.chemaxon.calculations.common.CancelObserver
  • com.chemaxon.calculations.common.ProgressObserver (also extends java.lang.AutoCloseable)
    • com.chemaxon.calculations.common.SubProgressObserver
• com.chemaxon.descriptors.fingerprints.cfp.CfpParameters.ConstructCfpGenerator
• chemaxon.checkers.runner.CheckerRunner
• chemaxon.struc.CIPStereoDescriptorIface
• chemaxon.struc.CIPStereoDescriptorIface.CIPValue
• java.lang.Cloneable
  • chemaxon.standardizer.runner.StandardizerActionRunner
• com.chemaxon.clustering.common.Cluster<T>
  • com.chemaxon.clustering.common.HierarchicCluster<T>
    • com.chemaxon.clustering.common.IDBasedHierarchicCluster
• com.chemaxon.descriptors.common.ComparisonResult
  • com.chemaxon.descriptors.alignment.ShapeComparisonResult
• chemaxon.standardizer.ConcurrentStandardizerProcessor.MolTransformer
• chemaxon.checkers.runner.configuration.reader.ConfigurationReader
• java.util.function.Consumer<T>
  • com.chemaxon.calculations.io.Sink<T>
• chemaxon.marvin.util.CopyOptConstants
• com.chemaxon.search.CustomMatcher
• com.chemaxon.search.CustomMatcherFactory
• chemaxon.marvin.alignment.atrop.DihedralScanListener
• chemaxon.marvin.paint.DispOptConsts
• com.chemaxon.clustering.common.DissimilarityInput
  • com.chemaxon.clustering.common.MolInput
• chemaxon.naming.document.annotate.DocumentAnnotator.Listener
• com.chemaxon.descriptors.fingerprints.ecfp.EcfpParameters.ConstructEcfpGenerator
• com.chemaxon.calculations.elemanal.ElementalAnalysis
• chemaxon.util.ErrorProcessor
• chemaxon.struc.sgroup.Expandable
• chemaxon.jep.FingerprintGenerator
• com.chemaxon.descriptors.alignment.FlexibilityModeParameterBuilder
• com.chemaxon.clustering.framework.FrameworkClusteringResults
• com.chemaxon.clustering.common.HierarchicClustering<T,C>
  • com.chemaxon.clustering.common.IDBasedHierarchicClustering
• chemaxon.marvin.calculations.HlbPlugin
• chemaxon.struc.HybridizationStateConsts
• chemaxon.formats.documents.jchemoffice.ICardLayout
• chemaxon.formats.documents.jchemoffice.ICellData
• chemaxon.formats.documents.jchemoffice.ICellFormat
• chemaxon.formats.documents.jchemoffice.IDocumentConverter
• chemaxon.formats.documents.jchemoffice.IDocumentReader
• chemaxon.formats.documents.jchemoffice.IDocumentTemplateWriter
• chemaxon.formats.documents.jchemoffice.IDocumentWriter
• chemaxon.formats.documents.jchemoffice.IGenericOptions
  • chemaxon.formats.documents.jchemoffice.IConversionOptions
  • chemaxon.formats.documents.jchemoffice.ISettings
  • chemaxon.formats.documents.jchemoffice.ITemplateWriterOptions
• chemaxon.formats.documents.jchemexcel.ILocation
• chemaxon.formats.documents.jchemoffice.IMoleculeData
• chemaxon.formats.documents.jchemexcel.IMoleculeMap
• chemaxon.formats.documents.jchemoffice.IMoleculeRenderer
• chemaxon.struc.Incomplecule
  • chemaxon.struc.Smolecule
    • chemaxon.struc.WSmolecule
• chemaxon.formats.documents.jchemoffice.IPropertyTableCellFormats
• chemaxon.formats.documents.jchemoffice.ITableCell
• chemaxon.formats.documents.jchemoffice.ITableModel
• java.util.Iterator<E>
  • com.chemaxon.calculations.io.CloseableIterator<T> (also extends java.io.Closeable)
  • chemaxon.util.iterator.MoleculeIterator
• chemaxon.formats.documents.jchemexcel.IWorkbookReader
• com.chemaxon.clustering.wards.LanceWilliamsMerge
• chemaxon.clustering.adapter.LegacyLibraryMcsParameters
• com.chemaxon.clustering.common.LevelAssigner<L,T>
  • com.chemaxon.clustering.common.IDBasedAssigner
• com.chemaxon.descriptors.fingerprints.maccs.MaccsParameters.ConstructMaccsGenerator
• chemaxon.marvin.space.MacroMoleculeComponent.MoleculeVisualizer
• com.chemaxon.mapper.Mapper<T>
• chemaxon.marvin.alignment.MCSAlignment
• chemaxon.marvin.alignment.MCSAlignmentResult
• chemaxon.descriptors.MDHypothesisGenerator
• chemaxon.marvin.view.MDocStorage.Listener
• com.chemaxon.descriptors.db.MDReaderFactory
  • com.chemaxon.descriptors.fingerprints.cfp.CfpTableReader.Factory
  • com.chemaxon.descriptors.fingerprints.ecfp.EcfpTableReader.Factory
  • com.chemaxon.descriptors.fingerprints.pf2d.PfTableReader.Factory
• com.chemaxon.calculations.io.MemoizedSparseCollection<T>
• chemaxon.jep.MolCondition
• chemaxon.descriptors.MolecularDescriptorGenerator
• chemaxon.util.MolFilter
• chemaxon.common.util.MProgressMonitor
• chemaxon.marvin.io.MRecordReader
• chemaxon.struc.MTransformable
• chemaxon.naming.NameConverter
• com.chemaxon.calculations.io.OrderedElement<T>
• chemaxon.marvin.alignment.PairwiseComparison
• com.chemaxon.apidiscovery.interfaces.ParameterBuilder<T>
• chemaxon.marvin.plugin.ParameterPanelHandler
• com.chemaxon.descriptors.fingerprints.pf2d.PfParameters.ConstructPfGenerator
• com.chemaxon.clustering.util.PostOrderDfsVisitor<T>
• chemaxon.jchem.file.ProgressWriter.Logger
• chemaxon.reaction.ReactantSetEnumeration
• chemaxon.sss.SearchConstants
• java.io.Serializable
  • com.chemaxon.descriptors.metrics.BinaryVectorComparator (also extends com.chemaxon.descriptors.metrics.MetricMetadata)
  • chemaxon.jep.ChemContext (also extends chemaxon.marvin.util.CallbackIface)
  • com.chemaxon.descriptors.common.Descriptor (also extends com.chemaxon.descriptors.common.Guarded)
    • com.chemaxon.descriptors.common.BinaryVectorDescriptor
      • com.chemaxon.descriptors.fingerprints.cfp.Cfp
      • com.chemaxon.descriptors.fingerprints.ecfp.Ecfp
      • com.chemaxon.descriptors.fingerprints.maccs.Maccs
    • com.chemaxon.descriptors.common.FloatVectorDescriptor (also extends java.io.Serializable)
      • com.chemaxon.descriptors.fingerprints.pf2d.PharmacophoreFP
    • com.chemaxon.descriptors.alignment.ShapeDescriptor
      • com.chemaxon.descriptors.alignment.DRShapeDescriptor
  • com.chemaxon.descriptors.common.DescriptorComparator<D> (also extends com.chemaxon.descriptors.common.Guarded)
    • com.chemaxon.descriptors.fingerprints.cfp.CfpComparator
    • com.chemaxon.descriptors.fingerprints.ecfp.EcfpComparator
    • com.chemaxon.descriptors.fingerprints.maccs.MaccsComparator
    • com.chemaxon.descriptors.fingerprints.pf2d.PfComparator
    • com.chemaxon.descriptors.alignment.ShapeComparator<T>
  • com.chemaxon.descriptors.common.DescriptorGenerator<B> (also extends com.chemaxon.descriptors.common.DescriptorSerializer<B>)
    • com.chemaxon.descriptors.vectors.binary.BvGenerator (also extends com.chemaxon.descriptors.metrics.BinaryVectorMetricFactory<C>)
    • com.chemaxon.descriptors.fingerprints.cfp.CfpGenerator (also extends com.chemaxon.descriptors.metrics.BinaryVectorMetricFactory<C>)
    • com.chemaxon.descriptors.fingerprints.ecfp.EcfpGenerator (also extends com.chemaxon.descriptors.metrics.BinaryVectorMetricFactory<C>)
    • com.chemaxon.descriptors.vectors.floats.FvGenerator (also extends com.chemaxon.descriptors.metrics.FloatVectorMetricFactory<C>)
    • com.chemaxon.descriptors.fingerprints.pf2d.PfGenerator (also extends com.chemaxon.descriptors.metrics.FloatVectorMetricFactory<C>)
  • com.chemaxon.descriptors.common.DescriptorParameters
  • com.chemaxon.descriptors.common.DescriptorSerializer<B> (also extends com.chemaxon.descriptors.common.Guarded)
    • com.chemaxon.descriptors.common.DescriptorGenerator<B> (also extends java.io.Serializable)
      • com.chemaxon.descriptors.vectors.binary.BvGenerator (also extends com.chemaxon.descriptors.metrics.BinaryVectorMetricFactory<C>)
      • com.chemaxon.descriptors.fingerprints.cfp.CfpGenerator (also extends com.chemaxon.descriptors.metrics.BinaryVectorMetricFactory<C>)
      • com.chemaxon.descriptors.fingerprints.ecfp.EcfpGenerator (also extends com.chemaxon.descriptors.metrics.BinaryVectorMetricFactory<C>)
      • com.chemaxon.descriptors.vectors.floats.FvGenerator (also extends com.chemaxon.descriptors.metrics.FloatVectorMetricFactory<C>)
      • com.chemaxon.descriptors.fingerprints.pf2d.PfGenerator (also extends com.chemaxon.descriptors.metrics.FloatVectorMetricFactory<C>)
  • com.chemaxon.descriptors.metrics.FloatVectorComparator (also extends com.chemaxon.descriptors.metrics.MetricMetadata)
  • com.chemaxon.descriptors.common.FloatVectorDescriptor (also extends com.chemaxon.descriptors.common.Descriptor)
    • com.chemaxon.descriptors.fingerprints.pf2d.PharmacophoreFP
  • com.chemaxon.descriptors.common.Guarded
    • com.chemaxon.descriptors.common.Descriptor (also extends java.io.Serializable)
      • com.chemaxon.descriptors.common.BinaryVectorDescriptor
        • com.chemaxon.descriptors.fingerprints.cfp.Cfp
        • com.chemaxon.descriptors.fingerprints.ecfp.Ecfp
        • com.chemaxon.descriptors.fingerprints.maccs.Maccs
      • com.chemaxon.descriptors.common.FloatVectorDescriptor (also extends java.io.Serializable)
        • com.chemaxon.descriptors.fingerprints.pf2d.PharmacophoreFP
      • com.chemaxon.descriptors.alignment.ShapeDescriptor
        • com.chemaxon.descriptors.alignment.DRShapeDescriptor
    • com.chemaxon.descriptors.common.DescriptorComparator<D> (also extends java.io.Serializable)
      • com.chemaxon.descriptors.fingerprints.cfp.CfpComparator
      • com.chemaxon.descriptors.fingerprints.ecfp.EcfpComparator
      • com.chemaxon.descriptors.fingerprints.maccs.MaccsComparator
      • com.chemaxon.descriptors.fingerprints.pf2d.PfComparator
      • com.chemaxon.descriptors.alignment.ShapeComparator<T>
    • com.chemaxon.descriptors.common.DescriptorSerializer<B> (also extends java.io.Serializable)
      • com.chemaxon.descriptors.common.DescriptorGenerator<B> (also extends java.io.Serializable)
        • com.chemaxon.descriptors.vectors.binary.BvGenerator (also extends com.chemaxon.descriptors.metrics.BinaryVectorMetricFactory<C>)
        • com.chemaxon.descriptors.fingerprints.cfp.CfpGenerator (also extends com.chemaxon.descriptors.metrics.BinaryVectorMetricFactory<C>)
        • com.chemaxon.descriptors.fingerprints.ecfp.EcfpGenerator (also extends com.chemaxon.descriptors.metrics.BinaryVectorMetricFactory<C>)
        • com.chemaxon.descriptors.vectors.floats.FvGenerator (also extends com.chemaxon.descriptors.metrics.FloatVectorMetricFactory<C>)
        • com.chemaxon.descriptors.fingerprints.pf2d.PfGenerator (also extends com.chemaxon.descriptors.metrics.FloatVectorMetricFactory<C>)
  • com.chemaxon.descriptors.metrics.MetricFactory<C>
    • com.chemaxon.descriptors.metrics.BinaryVectorMetricFactory<C>
      • com.chemaxon.descriptors.vectors.binary.BvGenerator (also extends com.chemaxon.descriptors.common.DescriptorGenerator<B>)
      • com.chemaxon.descriptors.fingerprints.cfp.CfpGenerator (also extends com.chemaxon.descriptors.common.DescriptorGenerator<B>)
      • com.chemaxon.descriptors.fingerprints.ecfp.EcfpGenerator (also extends com.chemaxon.descriptors.common.DescriptorGenerator<B>)
    • com.chemaxon.descriptors.metrics.FloatVectorMetricFactory<C>
      • com.chemaxon.descriptors.vectors.floats.FvGenerator (also extends com.chemaxon.descriptors.common.DescriptorGenerator<B>)
      • com.chemaxon.descriptors.fingerprints.pf2d.PfGenerator (also extends com.chemaxon.descriptors.common.DescriptorGenerator<B>)
  • com.chemaxon.descriptors.metrics.MetricMetadata
    • com.chemaxon.descriptors.metrics.BinaryVectorComparator (also extends java.io.Serializable)
    • com.chemaxon.descriptors.metrics.FloatVectorComparator (also extends java.io.Serializable)
  • com.chemaxon.overlap.io.StandardizerWrapper
• chemaxon.marvin.services.ServiceDescriptorEditor<T>
• chemaxon.marvin.services.ServiceDescriptorEditorProvider
• chemaxon.marvin.services.ServiceDescriptorReader
• chemaxon.marvin.services.ServiceDescriptorWriter
• chemaxon.marvin.services.ServiceDialogProvider
• com.chemaxon.clustering.util.SimpleDfsVisitor
• com.chemaxon.search.SimpleSearcher
• com.chemaxon.clustering.common.SingleLevelClustering<T,C>
  • com.chemaxon.clustering.common.IDBasedSingleLevelClustering
• com.chemaxon.calculations.solubility.SolubilityCategory
• com.chemaxon.calculations.solubility.SolubilityResult
• chemaxon.standardizer.StandardizerAction
• chemaxon.standardizer.configuration.reader.StandardizerConfigurationReader
• com.chemaxon.calculations.stereoanal.stereocenters.StereoCenter
• com.chemaxon.calculations.stereoanal.filters.StereoCenterVisitor
• chemaxon.struc.StereoConstants
• com.chemaxon.calculations.stereoanal.StereoConstants
• com.chemaxon.calculations.stereoanal.StereoConstants.StereoValue
• chemaxon.marvin.calculations.StructuralFrameworksPlugin.VerbosePrinter
• chemaxon.checkers.StructureChecker
• chemaxon.checkers.result.StructureCheckerResult
  • chemaxon.checkers.result.ExternalStructureCheckerResult
• chemaxon.fixers.StructureFixer
• chemaxon.jchem.db.TableTypeConstants
• chemaxon.marvin.view.TaskScheduler
• java.awt.datatransfer.Transferable
  • chemaxon.marvin.modules.datatransfer.MTransferable
• com.chemaxon.search.transformation.Transformer
• com.chemaxon.search.mcs.upperbound.UpperBoundCalculator

Annotation Type Hierarchy

• com.chemaxon.apidiscovery.annotations.BuilderClass (implements java.lang.annotation.Annotation)
• chemaxon.checkers.CheckerInfo (implements java.lang.annotation.Annotation)
• com.chemaxon.apidiscovery.annotations.Creator (implements java.lang.annotation.Annotation)
• com.chemaxon.apidiscovery.annotations.Description (implements java.lang.annotation.Annotation)
• chemaxon.fixers.FixerInfo (implements java.lang.annotation.Annotation)
• chemaxon.fixers.Fixes (implements java.lang.annotation.Annotation)
• chemaxon.fixers.FixesExternal (implements java.lang.annotation.Annotation)
• com.chemaxon.apidiscovery.annotations.Parameter (implements java.lang.annotation.Annotation)
• com.chemaxon.apidiscovery.annotations.Parametrized (implements java.lang.annotation.Annotation)
• chemaxon.checkers.Persistent (implements java.lang.annotation.Annotation)
• com.chemaxon.common.annotations.PublicAPI (implements java.lang.annotation.Annotation)
• chemaxon.standardizer.StandardizerActionInfo (implements java.lang.annotation.Annotation)
• com.chemaxon.common.annotations.SubjectToRemoval (implements java.lang.annotation.Annotation)

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • chemaxon.standardizer.actions.AbsoluteStereoAction.Type
    • chemaxon.marvin.alignment.AlignmentAccuracyMode
    • chemaxon.marvin.alignment.AlignmentProperties (implements java.io.Serializable)
    • chemaxon.marvin.alignment.AlignmentProperties.ColoringScheme (implements java.io.Serializable)
    • chemaxon.marvin.alignment.AlignmentProperties.ColorNotSpecifiedCase
    • chemaxon.marvin.alignment.AlignmentProperties.DegreeOfFreedomType
    • chemaxon.marvin.alignment.AlignmentProperties.FlexibilityMode
    • chemaxon.marvin.alignment.AlignmentProperties.NodeType (implements java.io.Serializable)
    • chemaxon.marvin.alignment.AlignmentProperties.OrientationType (implements java.io.Serializable)
    • chemaxon.marvin.paint.constants.AnyBondStyle
    • chemaxon.standardizer.actions.AromatizeAction.Type
    • com.chemaxon.search.transformation.transformers.Aromatizer (implements com.chemaxon.search.transformation.AromatizationDataProvider, com.chemaxon.search.transformation.Transformer)
    • chemaxon.struc.AtomProperty.Radical
    • com.chemaxon.descriptors.alignment.AtomTyping (implements java.io.Serializable)
    • chemaxon.marvin.alignment.AtropIsomerDetector.Accuracy
    • com.chemaxon.descriptors.metrics.BinaryMetrics (implements com.chemaxon.descriptors.metrics.BinaryVectorComparator)
    • com.chemaxon.descriptors.common.BinaryVectors.Endianness
    • com.chemaxon.descriptors.vectors.binary.BvParameters.StringFormat
    • chemaxon.jchem.db.cache.CacheManager (implements chemaxon.jchem.db.cache.CacheManagerMBean)
    • chemaxon.jchem.db.cache.CacheManager.CacheRemovalMethodImplementation (implements chemaxon.jchem.db.cache.CacheRemovalMethod)
    • chemaxon.formats.documents.jchemoffice.CardLayoutArrangement
    • chemaxon.checkers.CheckerSeverity
    • chemaxon.struc.CIPStereoDescriptorIface.CIPType
    • chemaxon.struc.CIPStereoDescriptorIface.CIPValue.AtropStereoIUPACValue (implements chemaxon.struc.CIPStereoDescriptorIface.CIPValue)
    • chemaxon.struc.CIPStereoDescriptorIface.CIPValue.AtropStereoValue (implements chemaxon.struc.CIPStereoDescriptorIface.CIPValue)
    • chemaxon.struc.CIPStereoDescriptorIface.CIPValue.AxialStereoIUPACValue (implements chemaxon.struc.CIPStereoDescriptorIface.CIPValue)
    • chemaxon.struc.CIPStereoDescriptorIface.CIPValue.AxialStereoValue (implements chemaxon.struc.CIPStereoDescriptorIface.CIPValue)
    • chemaxon.struc.CIPStereoDescriptorIface.CIPValue.CisTransStereoIUPACValue (implements chemaxon.struc.CIPStereoDescriptorIface.CIPValue)
    • chemaxon.struc.CIPStereoDescriptorIface.CIPValue.CisTransStereoValue (implements chemaxon.struc.CIPStereoDescriptorIface.CIPValue)
    • chemaxon.struc.CIPStereoDescriptorIface.CIPValue.TetrahedralStereoIUPACValue (implements chemaxon.struc.CIPStereoDescriptorIface.CIPValue)
    • chemaxon.struc.CIPStereoDescriptorIface.CIPValue.TetrahedralStereoValue (implements chemaxon.struc.CIPStereoDescriptorIface.CIPValue)
    • chemaxon.standardizer.advancedactions.Clean2DAction.Type
    • chemaxon.formats.documents.jchemoffice.ConditionalRuleOperators
    • chemaxon.standardizer.actions.ConvertDoubleBondsAction.Type
    • chemaxon.standardizer.actions.ConvertToEnhancedStereoAction.Type
    • chemaxon.marvin.paint.constants.CoordinateBondOnMulticenterStyle
    • chemaxon.marvin.paint.constants.CoordinateBondStyle
    • com.chemaxon.calculations.solubility.DefaultSolubilityCategory (implements com.chemaxon.calculations.solubility.SolubilityCategory)
    • chemaxon.calculations.dipole.DipoleResult.Unit
    • chemaxon.naming.document.annotate.DocumentAnnotator.DocumentType
    • chemaxon.naming.document.annotate.DocumentAnnotatorOptions.ImageFormat
    • chemaxon.formats.documents.jchemoffice.DocumentType
    • com.chemaxon.descriptors.alignment.DRShapeMetrics (implements com.chemaxon.descriptors.metrics.MetricMetadata)
    • com.chemaxon.descriptors.fingerprints.ecfp.EcfpAtomTypizers
    • chemaxon.formats.documents.jchemoffice.FileNameGenerationMode
    • chemaxon.checkers.FixMode
    • com.chemaxon.descriptors.metrics.FloatVectorMetrics (implements com.chemaxon.descriptors.metrics.FloatVectorComparator, java.io.Serializable)
    • chemaxon.formats.documents.jchemoffice.FontAlignment
    • chemaxon.formats.documents.jchemoffice.FontStyle
    • com.chemaxon.descriptors.vectors.floats.FvParameters.NumericRepresentation
    • com.chemaxon.descriptors.vectors.floats.FvParameters.SparseCompression
    • chemaxon.sss.search.options.HaltOnErrorOption (implements chemaxon.sss.search.options.HasOptionString)
    • com.chemaxon.clustering.common.HierarchicClustering.Alignment
    • chemaxon.sss.search.options.HomologyTranslationOption (implements chemaxon.sss.search.options.HasOptionString)
    • chemaxon.marvin.io.image.ImageExporter.AtomNumberingType
    • chemaxon.marvin.io.image.ImageExporter.CarbonDisplay
    • chemaxon.marvin.io.image.ImageExporter.ChiralityDisplayOption
    • chemaxon.marvin.io.image.ImageExporter.Coloring
    • chemaxon.marvin.io.image.ImageExporter.HydrogenDisplayOption
    • chemaxon.marvin.io.image.ImageExporter.LigandOrderVisibility
    • chemaxon.marvin.io.image.ImageExporter.LineType
    • chemaxon.marvin.io.image.ImageExporter.Rendering
    • chemaxon.marvin.io.image.ImageExportParamConstants.anyBondValues
    • chemaxon.marvin.io.image.ImageExportParamConstants.carbonLabelVisibilityValues
    • chemaxon.marvin.io.image.ImageExportParamConstants.chiralValues
    • chemaxon.marvin.io.image.ImageExportParamConstants.coloringValues
    • chemaxon.marvin.io.image.ImageExportParamConstants.downwedgeValues
    • chemaxon.marvin.io.image.ImageExportParamConstants.implicitHValues
    • chemaxon.marvin.io.image.ImageExportParamConstants.renderingValues
    • chemaxon.formats.documents.jchemoffice.ImageGenerationType
    • chemaxon.marvin.services.json.JsonServiceDescriptor.Method
    • com.chemaxon.mapper.Mapper.MappingStyle
    • chemaxon.sss.search.options.MarkushAromaticityHandlingOption (implements chemaxon.sss.search.options.HasOptionString)
    • chemaxon.descriptors.MetricsType
    • chemaxon.struc.MoleculeGraph.ValenceCheckState
    • chemaxon.marvin.io.MolImportModule.PreferredView
    • chemaxon.calculations.nmr.NMRSpectrum.Nucleus
    • chemaxon.calculations.nmr.NMRSpectrum.Unit
    • com.chemaxon.apidiscovery.ParameterWrapper.ParameterType
    • chemaxon.marvin.io.image.exporter.PngExporter.BitPixelValues
    • chemaxon.formats.documents.jchemoffice.PropertyTablePosition
    • com.chemaxon.common.annotations.RemovalDate
    • chemaxon.standardizer.actions.RemoveFragmentAction.Measurement
    • chemaxon.standardizer.actions.RemoveFragmentAction.Method
    • chemaxon.marvin.paint.constants.RenderingStyle
    • com.chemaxon.search.mcs.RingHandlingMode
    • com.chemaxon.search.mcs.SearchMode
    • chemaxon.standardizer.actions.SetHydrogenIsotopeSymbolAction.Type
    • chemaxon.sss.search.options.SetOfSmallestRingsOption (implements chemaxon.sss.search.options.HasOptionString)
    • chemaxon.struc.SgroupType
    • com.chemaxon.descriptors.alignment.ShapeFunction (implements java.io.Serializable)
    • com.chemaxon.descriptors.alignment.ShapeMetrics (implements com.chemaxon.descriptors.metrics.MetricMetadata)
    • chemaxon.descriptors.SimilarityCalculatorFactory.Representation
    • com.chemaxon.calculations.io.SimpleErrorHandling
    • com.chemaxon.calculations.solubility.SolubilityUnit
    • chemaxon.standardizer.concurrent.StandardizerRunner.ErrorHandlingPolicy
    • com.chemaxon.calculations.stereoanal.StereoConstants.EnhancedStereoType
    • com.chemaxon.calculations.stereoanal.StereoConstants.StereoValue.AtropStereo (implements com.chemaxon.calculations.stereoanal.StereoConstants.StereoValue)
    • com.chemaxon.calculations.stereoanal.StereoConstants.StereoValue.AxialStereo (implements com.chemaxon.calculations.stereoanal.StereoConstants.StereoValue)
    • com.chemaxon.calculations.stereoanal.StereoConstants.StereoValue.CisTransStereo (implements com.chemaxon.calculations.stereoanal.StereoConstants.StereoValue)
    • com.chemaxon.calculations.stereoanal.StereoConstants.StereoValue.TetrahedralStereo (implements com.chemaxon.calculations.stereoanal.StereoConstants.StereoValue)
    • com.chemaxon.calculations.stereoanal.StereoConstants.Type
    • com.chemaxon.calculations.stereoisomers.StereoisomerSettings.StereoisomerType
    • chemaxon.marvin.calculations.StructuralFrameworksPlugin.FrameworkTypes
    • chemaxon.checkers.StructureCheckerErrorType
    • chemaxon.checkers.StructureCheckOptions.Mode
    • chemaxon.checkers.StructureCheckOptions.Type
    • chemaxon.sss.search.options.TargetHomologyMatchingMode (implements chemaxon.sss.search.options.HasOptionString)